diff --git a/R/convenience_visiumHD.R b/R/convenience_visiumHD.R index 1f8178665..a0c3ca5fe 100644 --- a/R/convenience_visiumHD.R +++ b/R/convenience_visiumHD.R @@ -138,7 +138,7 @@ setMethod("print", signature("VisiumHDReader"), function(x, ...) show(x)) #' array_subset_col = c(500, 1000)) #' #' # Create a `giotto` object and add the loaded data -#' TODO +#' # TODO #' } #' @export importVisiumHD <- function( diff --git a/R/feature_set_enrichment.R b/R/feature_set_enrichment.R index c5bf382ea..8bb2568cb 100644 --- a/R/feature_set_enrichment.R +++ b/R/feature_set_enrichment.R @@ -46,7 +46,7 @@ #' for more details, see: #' https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php/Data_formats#RNK:_Ranked_list_file_format_.28.2A.rnk.29 #' -#' For more information on parameter convetions, +#' For more information on parameter conventions, #' please reference GSEA's documentation here: #' https://www.gsea-msigdb.org/gsea/doc/GSEAUserGuideTEXT.htm#_Syntax #' @export diff --git a/man/doFeatureSetEnrichment.Rd b/man/doFeatureSetEnrichment.Rd index 359b7d3e5..470e47dbd 100644 --- a/man/doFeatureSetEnrichment.Rd +++ b/man/doFeatureSetEnrichment.Rd @@ -87,7 +87,7 @@ column 1 = gene symbols, column 2 = weight or rank metric for more details, see: https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php/Data_formats#RNK:_Ranked_list_file_format_.28.2A.rnk.29 -For more information on parameter convetions, +For more information on parameter conventions, please reference GSEA's documentation here: https://www.gsea-msigdb.org/gsea/doc/GSEAUserGuideTEXT.htm#_Syntax } diff --git a/man/importVisiumHD.Rd b/man/importVisiumHD.Rd index 08fb3801b..cf54b664c 100644 --- a/man/importVisiumHD.Rd +++ b/man/importVisiumHD.Rd @@ -76,6 +76,6 @@ my_transcripts = readerHD$load_transcripts(array_subset_row = c(500, 1000), array_subset_col = c(500, 1000)) # Create a `giotto` object and add the loaded data -TODO +# TODO } }