-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathenvironment.yml
88 lines (87 loc) · 2.43 KB
/
environment.yml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
name: ont_meth
channels:
- anaconda
- conda-forge
- bioconda
- defaults
dependencies:
- cmake=3.14.0=h52cb24c_0
- intel-openmp=2020.2=254
- libgcc=7.2.0=h69d50b8_2
- libssh2=1.9.0=h1ba5d50_1
- mkl=2020.2=256
- scikit-learn=0.20.3=py27h22eb022_0
- scipy=0.19.1=py27h1edc525_3
- six=1.15.0=py_0
- biopython=1.68=py27_0
- bwa=0.7.17=h5bf99c6_8
- eigen=3.2=3
- fast5=0.6.5=hdfd78af_3
- htslib=1.12=h9093b5e_1
- k8=0.2.5=h9a82719_1
- minimap2=2.20=h5bf99c6_0
- mmtf-python=1.0.2=py27_0
- samtools=1.12=h9aed4be_1
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=1_llvm
- blas=2.109=openblas
- blas-devel=3.9.0=9_openblas
- bzip2=1.0.8=h7f98852_4
- c-ares=1.17.1=h7f98852_1
- ca-certificates=2021.5.30=ha878542_0
- certifi=2019.11.28=py27h8c360ce_1
- curl=7.77.0=hea6ffbf_0
- expat=2.4.1=h9c3ff4c_0
- freetype=2.10.4=h0708190_1
- h5py=2.7.1=py27_1
- hdf5=1.8.18=3
- jbig=2.1=h7f98852_2003
- jpeg=9d=h36c2ea0_0
- krb5=1.19.1=hcc1bbae_0
- ld_impl_linux-64=2.36.1=hea4e1c9_0
- lerc=2.2.1=h9c3ff4c_0
- libblas=3.9.0=9_openblas
- libcblas=3.9.0=9_openblas
- libcurl=7.77.0=h2574ce0_0
- libdeflate=1.7=h7f98852_5
- libedit=3.1.20191231=he28a2e2_2
- libev=4.33=h516909a_1
- libffi=3.2.1=he1b5a44_1007
- libgcc-ng=9.3.0=h2828fa1_19
- libgfortran=3.0.0=1
- libgfortran-ng=9.3.0=hff62375_19
- libgfortran5=9.3.0=hff62375_19
- libgomp=9.3.0=h2828fa1_19
- liblapack=3.9.0=9_openblas
- liblapacke=3.9.0=9_openblas
- libnghttp2=1.43.0=h812cca2_0
- libopenblas=0.3.15=pthreads_h8fe5266_1
- libpng=1.6.37=h21135ba_2
- libstdcxx-ng=9.3.0=h6de172a_19
- libtiff=4.3.0=hf544144_1
- libuv=1.41.0=h7f98852_0
- libwebp-base=1.2.0=h7f98852_2
- llvm-openmp=11.1.0=h4bd325d_1
- lz4-c=1.9.3=h9c3ff4c_0
- msgpack-python=1.0.0=py27hc9558a2_0
- ncurses=6.2=h58526e2_4
- numpy=1.16.5=py27h95a1406_0
- olefile=0.46=pyh9f0ad1d_1
- openblas=0.3.15=pthreads_h4748800_1
- openssl=1.1.1k=h7f98852_0
- perl=5.32.1=0_h7f98852_perl5
- pillow=6.2.1=py27hd70f55b_1
- pip=20.1.1=pyh9f0ad1d_0
- python=2.7.15=h5a48372_1011_cpython
- python_abi=2.7=1_cp27mu
- readline=8.1=h46c0cb4_0
- reportlab=3.5.32=py27h7d98c4e_0
- rhash=1.4.1=h7f98852_0
- setuptools=44.0.0=py27_0
- sqlite=3.36.0=h9cd32fc_0
- tk=8.6.10=h21135ba_1
- wheel=0.36.2=pyhd3deb0d_0
- xz=5.2.5=h516909a_1
- zlib=1.2.11=h516909a_1010
- zstd=1.5.0=ha95c52a_0
prefix: /lustre/home/ejh243/.conda/envs/ont_meth