diff --git a/README.md b/README.md index 8d5475c..5c4faad 100644 --- a/README.md +++ b/README.md @@ -48,15 +48,15 @@ Three key observations at the end of 2021 motivated me to start this project. | Module | Type (Data Modality) | DOI | Stars | | :---: | :---: | :---: | :---: | -| [Unsupervised Analysis](https://github.com/epigen/unsupervised_analysis) | General Purpose | [![DOI](https://zenodo.org/badge/475465311.svg)](https://zenodo.org/badge/latestdoi/475465311) | GitHub Repo stars | -| [Processing & Integration](https://github.com/epigen/spilterlize_integrate) | Bioinformatics | [![DOI](https://zenodo.org/badge/659800258.svg)](https://zenodo.org/badge/latestdoi/659800258) | GitHub Repo stars | -| [Differential Analysis with limma](https://github.com/epigen/dea_limma) | Bioinformatics | [![DOI](https://zenodo.org/badge/524038188.svg)](https://zenodo.org/badge/latestdoi/524038188) | GitHub Repo stars -| [Enrichment Analysis](https://github.com/epigen/enrichment_analysis) | Bioinformatics | [![DOI](https://zenodo.org/badge/377527671.svg)](https://zenodo.org/badge/latestdoi/377527671) | GitHub Repo stars | -| [Genome Track Visualization](https://github.com/epigen/genome_tracks) | Bioinformatics | | GitHub Repo stars | +| [Unsupervised Analysis](https://github.com/epigen/unsupervised_analysis) | General Purpose
(tabular data) | [![DOI](https://zenodo.org/badge/475465311.svg)](https://zenodo.org/badge/latestdoi/475465311) | GitHub Repo stars | +| [Processing & Integration](https://github.com/epigen/spilterlize_integrate) | Bioinformatics
(NGS counts) | [![DOI](https://zenodo.org/badge/659800258.svg)](https://zenodo.org/badge/latestdoi/659800258) | GitHub Repo stars | +| [Differential Analysis with limma](https://github.com/epigen/dea_limma) | Bioinformatics
(NGS data) | [![DOI](https://zenodo.org/badge/524038188.svg)](https://zenodo.org/badge/latestdoi/524038188) | GitHub Repo stars +| [Enrichment Analysis](https://github.com/epigen/enrichment_analysis) | Bioinformatics
(genes/genomic regions) | [![DOI](https://zenodo.org/badge/377527671.svg)](https://zenodo.org/badge/latestdoi/377527671) | GitHub Repo stars | +| [Genome Track Visualization](https://github.com/epigen/genome_tracks) | Bioinformatics
(aligned BAM files) | [![DOI](https://zenodo.org/badge/438573546.svg)](https://zenodo.org/doi/10.5281/zenodo.10849097) | GitHub Repo stars | | [ATAC-seq Processing](https://github.com/epigen/atacseq_pipeline) | Bioinformatics
(ATAC-seq) | [![DOI](https://zenodo.org/badge/350342694.svg)](https://zenodo.org/doi/10.5281/zenodo.6323634) | GitHub Repo stars | -| [scRNA-seq Processing using Seurat](https://github.com/epigen/scrnaseq_processing_seurat) | Bioinformatics
(sc/snRNA-seq) | [![DOI](https://zenodo.org/badge/468752490.svg)](https://zenodo.org/doi/10.5281/zenodo.10679327) | GitHub Repo stars | -| [Differential Analysis using Seurat](https://github.com/epigen/dea_seurat) | Bioinformatics
(sc/snRNA-seq) | [![DOI](https://zenodo.org/badge/483638364.svg)](https://zenodo.org/doi/10.5281/zenodo.10689139) | GitHub Repo stars | -| [Perturbation Analysis using Mixscape from Seurat](https://github.com/epigen/mixscape_seurat) | Bioinformatics
(sc/snRNA-seq) | [![DOI](https://zenodo.org/badge/481635018.svg)](https://zenodo.org/badge/latestdoi/481635018) | GitHub Repo stars | +| [scRNA-seq Processing using Seurat](https://github.com/epigen/scrnaseq_processing_seurat) | Bioinformatics
(scRNA-seq) | [![DOI](https://zenodo.org/badge/468752490.svg)](https://zenodo.org/doi/10.5281/zenodo.10679327) | GitHub Repo stars | +| [Differential Analysis using Seurat](https://github.com/epigen/dea_seurat) | Bioinformatics
(scRNA-seq) | [![DOI](https://zenodo.org/badge/483638364.svg)](https://zenodo.org/doi/10.5281/zenodo.10689139) | GitHub Repo stars | +| [Perturbation Analysis using Mixscape from Seurat](https://github.com/epigen/mixscape_seurat) | Bioinformatics
(scCRISPR-seq) | [![DOI](https://zenodo.org/badge/481635018.svg)](https://zenodo.org/badge/latestdoi/481635018) | GitHub Repo stars | ## Installation