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env.yml
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name: cellpose
channels:
- defaults
dependencies:
- blas=1.0=mkl
- blosc=1.21.0=h2842e9f_0
- brotli=1.0.9=hb1e8313_2
- brunsli=0.1=h23ab428_0
- bzip2=1.0.8=h1de35cc_0
- c-ares=1.17.1=h9ed2024_0
- ca-certificates=2021.10.26=hecd8cb5_2
- certifi=2021.10.8=py38hecd8cb5_0
- cfitsio=3.470=hee0f690_6
- charls=2.2.0=h23ab428_0
- cloudpickle=2.0.0=pyhd3eb1b0_0
- cycler=0.10.0=py38_0
- cytoolz=0.11.0=py38haf1e3a3_0
- dask-core=2021.10.0=pyhd3eb1b0_0
- fonttools=4.25.0=pyhd3eb1b0_0
- freetype=2.11.0=hd8bbffd_0
- fsspec=2021.10.1=pyhd3eb1b0_0
- giflib=5.2.1=haf1e3a3_0
- imagecodecs=2021.8.26=py38ha952a84_0
- imageio=2.9.0=pyhd3eb1b0_0
- intel-openmp=2021.4.0=hecd8cb5_3538
- jpeg=9d=h9ed2024_0
- jxrlib=1.1=haf1e3a3_2
- kiwisolver=1.3.1=py38h23ab428_0
- krb5=1.19.2=hcd88c3b_0
- lcms2=2.12=hf1fd2bf_0
- lerc=3.0=he9d5cce_0
- libaec=1.0.4=hb1e8313_1
- libcurl=7.78.0=hb8e4fae_0
- libcxx=12.0.0=h2f01273_0
- libdeflate=1.8=h9ed2024_5
- libedit=3.1.20210910=hca72f7f_0
- libev=4.33=h9ed2024_1
- libffi=3.2.1=h0a44026_1007
- libgfortran=3.0.1=h93005f0_2
- libnghttp2=1.41.0=h7580e61_2
- libpng=1.6.37=ha441bb4_0
- libssh2=1.9.0=ha12b0ac_1
- libtiff=4.2.0=h87d7836_0
- libwebp=1.2.0=hacca55c_0
- libwebp-base=1.2.0=h9ed2024_0
- libzopfli=1.0.3=hb1e8313_0
- llvm-openmp=12.0.0=h0dcd299_1
- locket=0.2.1=py38hecd8cb5_1
- lz4-c=1.9.3=h23ab428_1
- matplotlib=3.4.3=py38hecd8cb5_0
- matplotlib-base=3.4.3=py38h0a11d32_0
- mkl=2021.4.0=hecd8cb5_637
- mkl-service=2.4.0=py38h9ed2024_0
- mkl_fft=1.3.1=py38h4ab4a9b_0
- mkl_random=1.2.2=py38hb2f4e1b_0
- munkres=1.1.4=py_0
- ncurses=6.3=hca72f7f_2
- networkx=2.6.3=pyhd3eb1b0_0
- numpy=1.20.3=py38h4b4dc7a_0
- numpy-base=1.20.3=py38he0bd621_0
- olefile=0.46=pyhd3eb1b0_0
- openjpeg=2.4.0=h66ea3da_0
- openssl=1.1.1l=h9ed2024_0
- packaging=21.0=pyhd3eb1b0_0
- partd=1.2.0=pyhd3eb1b0_0
- pillow=8.4.0=py38h98e4679_0
- pip=21.2.4=py38hecd8cb5_0
- pyparsing=3.0.4=pyhd3eb1b0_0
- python=3.8.0=h359304d_2
- python-dateutil=2.8.2=pyhd3eb1b0_0
- pywavelets=1.1.1=py38haf1e3a3_2
- pyyaml=6.0=py38hca72f7f_1
- readline=7.0=h1de35cc_5
- scikit-image=0.18.3=py38hae1ba45_0
- setuptools=58.0.4=py38hecd8cb5_0
- six=1.16.0=pyhd3eb1b0_0
- snappy=1.1.8=hb1e8313_0
- sqlite=3.33.0=hffcf06c_0
- tk=8.6.11=h7bc2e8c_0
- toolz=0.11.2=pyhd3eb1b0_0
- tornado=6.1=py38h9ed2024_0
- wheel=0.37.0=pyhd3eb1b0_1
- xz=5.2.5=h1de35cc_0
- yaml=0.2.5=haf1e3a3_0
- zfp=0.5.5=h23ab428_6
- zlib=1.2.11=h1de35cc_3
- zstd=1.4.9=h322a384_0
- pip:
- cachetools==4.2.4
- cellpose==0.7.1
- charset-normalizer==2.0.7
- edt==2.1.1
- fastremap==1.12.2
- google-api-core==2.2.2
- google-auth==2.3.3
- google-cloud-core==2.2.1
- google-cloud-storage==1.42.3
- google-crc32c==1.3.0
- google-resumable-media==2.1.0
- googleapis-common-protos==1.53.0
- idna==3.3
- llvmlite==0.37.0
- natsort==8.0.0
- numba==0.54.1
- opencv-python-headless==4.5.4.58
- protobuf==3.19.1
- pyasn1==0.4.8
- pyasn1-modules==0.2.8
- pyqt5==5.15.6
- pyqt5-qt5==5.15.2
- pyqt5-sip==12.9.0
- pyqtgraph==0.11.0rc0
- pytorch-ranger==0.1.1
- requests==2.26.0
- rsa==4.7.2
- scipy==1.7.2
- tifffile==2021.11.2
- torch==1.10.0
- torch-optimizer==0.3.0
- tqdm==4.62.3
- typing-extensions==4.0.0
- urllib3==1.26.7
prefix: /Users/Erin/miniconda3/envs/cellpose