The pipeline
\n\nngs-preprocess is built using Nextflow, a workflow tool to run tasks across multiple compute infrastructures in a very portable manner. It uses Docker/Singularity containers making installation trivial and results highly reproducible. It is an easy to use pipeline that uses state-of-the-art software for quality check and pre-processing ngs reads of Illumina, Pacbio and Oxford Nanopore Technologies.
", "license": "other-open", "title": "fmalmeida/ngs-preprocess: A pipeline for preprocessing short and long sequencing reads", - "version": "v2.6.1", + "version": "v2.6.2", "upload_type": "software", "creators": [ { diff --git a/CHANGELOG.md b/CHANGELOG.md index e5d5f3d..593f663 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -2,6 +2,15 @@ The tracking for changes started in v2.2 +## v2.6.2 -- [2024-Jan-19] + +* [[#24](https://github.com/fmalmeida/ngs-preprocess/issues/24)] - Added documentation on generated outputs, as requested in paper review +* [[#25](https://github.com/fmalmeida/ngs-preprocess/issues/25)] - Added documentation exemplifying use for non bacterial dataset, as requested in paper review +* Small fixes on SRA module to allow downloading bgiseq data, and avoid running on empty lines +* Updated Dockerfile to name the maximum of versions possible + +> Nothing has changed in terms of how tools are called and used, thus the docker image still the same. In fact, patch/fix releases (x.x.x) will always use the docker from breaking/features release (x.x) + ## v2.6.1 -- [2023-Oct-26] * [[#21](https://github.com/fmalmeida/ngs-preprocess/issues/21)] - Added/updated citation information diff --git a/nextflow.config b/nextflow.config index 24adf2a..1ebf237 100644 --- a/nextflow.config +++ b/nextflow.config @@ -93,5 +93,5 @@ manifest { homePage = "https://github.com/fmalmeida/ngs-preprocess" mainScript = "main.nf" nextflowVersion = ">=21.10.0" - version = "2.6.1" + version = "2.6.2" } \ No newline at end of file