From aacb2e187bf1910158e5463e8f1a1bc1d72d925a Mon Sep 17 00:00:00 2001 From: Drew Behrens Date: Fri, 9 Feb 2024 12:39:51 +0000 Subject: [PATCH] vignette building --- .github/workflows/check-bioc.yml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/.github/workflows/check-bioc.yml b/.github/workflows/check-bioc.yml index d1b6cebb..bab071e0 100644 --- a/.github/workflows/check-bioc.yml +++ b/.github/workflows/check-bioc.yml @@ -211,7 +211,7 @@ jobs: ## This pass does not use AnVIL and will thus update any packages ## that have seen been updated in Bioconductor message(paste('****', Sys.time(), 'pass number 2 at installing dependencies: any remaining dependencies ****')) - remotes::install_local(dependencies = TRUE, repos = BiocManager::repositories(), build_vignettes = FALSE, upgrade = TRUE, force = TRUE) + remotes::install_local(dependencies = TRUE, repos = BiocManager::repositories(), build_vignettes = TRUE, upgrade = TRUE, force = TRUE) shell: Rscript {0} - name: Install BiocGenerics @@ -248,7 +248,7 @@ jobs: options(crayon.enabled = TRUE) rcmdcheck::rcmdcheck( args = c("--no-manual", "--no-vignettes", "--timings"), - build_args = c("--no-build-vignettes", "--no-manual", "--keep-empty-dirs", "--no-resave-data"), + build_args = c("--no-manual", "--keep-empty-dirs", "--no-resave-data"), error_on = "warning", check_dir = "check" )