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ci.yml
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name: CI
on:
push:
branches:
- master
pull_request:
branches:
- master
workflow_dispatch:
concurrency:
group: ${{ github.workflow }}-${{ github.head_ref || github.ref_name }}
cancel-in-progress: true
jobs:
test:
runs-on: arc-runner
env:
TOX_COMMAND: "tox --skip-missing-interpreters false"
RESOLWE_POSTGRESQL_PORT: 55433
RESOLWE_REDIS_PORT: 56380
strategy:
matrix:
toxenv: ["py310", "py311", "py312"]
services:
postgres:
image: public.ecr.aws/docker/library/postgres:16
ports:
- 55433:5432
env:
POSTGRES_USER: resolwe
POSTGRES_DB: resolwe-bio
POSTGRES_HOST_AUTH_METHOD: trust
options: >-
--health-cmd pg_isready
--health-interval 10s
--health-timeout 5s
--health-retries 5
redis:
image: public.ecr.aws/docker/library/redis:7-alpine
ports:
- 56380:6379
options: >-
--health-cmd "redis-cli ping"
--health-interval 10s
--health-timeout 5s
--health-retries 5
steps:
- name: Checkout
uses: actions/checkout@v4
with:
lfs: true
fetch-depth: 0
# NOTE: If we are building the "master" branch or a pull request against the
# "master" branch, we allow installing pre-releases with the pip command.
- name: Allow pre-releases for master branch
if: github.ref == 'refs/heads/master'
run: echo "TOX_COMMAND=${{ env.TOX_COMMAND }} --pre" >> $GITHUB_ENV
- name: Assert PR is up-to-date
if: github.event_name == 'pull_request'
run: |
git_change_target_merge_base=$(git merge-base HEAD origin/${{ github.base_ref }})
git_change_target_sha=$(git rev-parse origin/${{ github.base_ref }})
if [[ "${git_change_target_merge_base}" != "${git_change_target_sha}" ]]; then
echo "Pull request is not up-to-date!"
echo "Please, rebase your pull request on top of '${{ github.base_ref }}' (commit: ${git_change_target_sha})."
exit 1
fi
- name: Documentation
run: |
${{ env.TOX_COMMAND }} -e docs
- name: Linters
run: |
${{ env.TOX_COMMAND }} -e linters
- name: Packaging
run: |
${{ env.TOX_COMMAND }} -e packaging
- name: Extras
run: |
${{ env.TOX_COMMAND }} -e extra
- name: Migrations
run: |
${{ env.TOX_COMMAND }} -e migrations
- name: Unit tests
timeout-minutes: 120
run: |
${{ env.TOX_COMMAND }} -e ${{ matrix.toxenv }}