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Investigate mouse_anchor readTable warnings #1176

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malachig opened this issue Jan 7, 2025 · 0 comments
Open

Investigate mouse_anchor readTable warnings #1176

malachig opened this issue Jan 7, 2025 · 0 comments
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pVACview
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5.2.0

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@malachig
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malachig commented Jan 7, 2025

When pVACview is loaded in R the following warnings are presented

Warning in read.table(curl("https://raw.githubusercontent.com/griffithlab/pVACtools/2a44403d9844a27cfca05bb158b87b747aba3ae2/pvactools/tools/pvacview/data/mouse_anchor_predictions_8_mer.tsv"),  :
  incomplete final line found by readTableHeader on 'https://raw.githubusercontent.com/griffithlab/pVACtools/2a44403d9844a27cfca05bb158b87b747aba3ae2/pvactools/tools/pvacview/data/mouse_anchor_predictions_8_mer.tsv'
Warning in read.table(curl("https://raw.githubusercontent.com/griffithlab/pVACtools/2a44403d9844a27cfca05bb158b87b747aba3ae2/pvactools/tools/pvacview/data/mouse_anchor_predictions_11_mer.tsv"),  :
  incomplete final line found by readTableHeader on 'https://raw.githubusercontent.com/griffithlab/pVACtools/2a44403d9844a27cfca05bb158b87b747aba3ae2/pvactools/tools/pvacview/data/mouse_anchor_predictions_11_mer.tsv'

Perhaps an issue with the end of some of these files?
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