Lab-Invitro-Imaging-System

An Automated Image Collection, Inference, & Visualization System

Project Organization

├── README.md          <- The top-level README for developers using this project.
├── hab-ml             <- HAB Machine Learning Repository
├── ui                 <- Frontend piece
├── pipeline.py        <- Script to begin deployment and visualization
└── run_livis.sh       <- Shell script for running end-to-end image collection

Requirements

• Python 2.7 or 3.5
• Git

git clone <REPO>
git submodule update --init --recursive

• Conda

$ pip install -r requirements.txt

To Start a New Collection, run:

./run_livis.sh

TODO: provide video for running it

The Resulting Images & UI

TODO: provide directory output