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environment.yml
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name: dta_pred
channels:
- conda-forge
- defaults
dependencies:
- boost=1.68.0=py36h3e44d54_1
- boost-cpp=1.68.0=h3a22d5f_0
- bzip2=1.0.6=h470a237_2
- cairo=1.14.12=h276e583_5
- fontconfig=2.13.1=h65d0f4c_0
- freetype=2.9.1=h6debe1e_4
- gettext=0.19.8.1=h5e8e0c9_1
- glib=2.56.2=h464dc38_1
- icu=58.2=hfc679d8_0
- libffi=3.2.1=hfc679d8_5
- libgfortran-ng=7.2.0=hdf63c60_3
- libiconv=1.15=h470a237_3
- libpng=1.6.36=ha92aebf_0
- libxcb=1.13=h470a237_2
- libxml2=2.9.8=h422b904_5
- mkl_fft=1.0.10=py36_0
- mkl_random=1.0.2=py36_0
- ncurses=6.1=hfc679d8_2
- olefile=0.46=py_0
- pandas=0.23.4=py36hf8a1672_0
- pillow=5.3.0=py36hc736899_0
- pip=18.1=py36_1000
- pixman=0.34.0=h470a237_3
- pthread-stubs=0.4=h470a237_1
- pycairo=1.18.0=py36h4d1f301_0
- python-dateutil=2.7.5=py_0
- pytz=2018.7=py_0
- readline=7.0=haf1bffa_1
- setuptools=40.6.3=py36_0
- six=1.12.0=py36_1000
- sqlite=3.26.0=hb1c47c0_0
- tk=8.6.9=ha92aebf_0
- wheel=0.32.3=py36_0
- xorg-kbproto=1.0.7=h470a237_2
- xorg-libice=1.0.9=h470a237_4
- xorg-libsm=1.2.3=h8c8a85c_0
- xorg-libx11=1.6.6=h470a237_0
- xorg-libxau=1.0.8=h470a237_6
- xorg-libxdmcp=1.1.2=h470a237_7
- xorg-libxext=1.3.3=h470a237_4
- xorg-libxrender=0.9.10=h470a237_2
- xorg-renderproto=0.11.1=h470a237_2
- xorg-xextproto=7.3.0=h470a237_2
- xorg-xproto=7.0.31=h470a237_7
- xz=5.2.4=h470a237_1
- zlib=1.2.11=h470a237_3
- asn1crypto=0.24.0=py36_0
- backcall=0.1.0=py36_0
- blas=1.0=mkl
- bleach=3.0.2=py36_0
- boto=2.49.0=py36_0
- boto3=1.9.35=py36_0
- botocore=1.12.35=py36_0
- ca-certificates=2018.03.07=0
- certifi=2018.11.29=py36_0
- cffi=1.11.5=py36he75722e_1
- chardet=3.0.4=py36_1
- cryptography=2.4.1=py36h1ba5d50_0
- cycler=0.10.0=py36_0
- dbus=1.13.2=h714fa37_1
- decorator=4.3.0=py36_0
- docutils=0.14=py36_0
- entrypoints=0.2.3=py36_2
- expat=2.2.6=he6710b0_0
- gensim=3.4.0=py36h14c3975_0
- gmp=6.1.2=h6c8ec71_1
- gst-plugins-base=1.14.0=hbbd80ab_1
- gstreamer=1.14.0=hb453b48_1
- idna=2.7=py36_0
- intel-openmp=2019.1=144
- jmespath=0.9.3=py36_0
- joblib=0.13.0=py36_0
- jsonschema=2.6.0=py36_0
- kiwisolver=1.0.1=py36hf484d3e_0
- libboost=1.65.1=habcd387_4
- libgcc-ng=8.2.0=hdf63c60_1
- libsodium=1.0.16=h1bed415_0
- libstdcxx-ng=8.2.0=hdf63c60_1
- markupsafe=1.1.0=py36h7b6447c_0
- matplotlib=3.0.2=py36h5429711_0
- mistune=0.8.4=py36h7b6447c_0
- mkl=2018.0.3=1
- nbconvert=5.3.1=py36_0
- nbformat=4.4.0=py36_0
- notebook=5.7.2=py36_0
- numpy=1.15.4=py36h1d66e8a_0
- numpy-base=1.15.4=py36h81de0dd_0
- openssl=1.1.1a=h7b6447c_0
- pandoc=2.2.3.2=0
- pandocfilters=1.4.2=py36_1
- parso=0.3.1=py36_0
- pcre=8.42=h439df22_0
- pexpect=4.6.0=py36_0
- pickleshare=0.7.5=py36_0
- prometheus_client=0.4.2=py36_0
- prompt_toolkit=2.0.7=py36_0
- ptyprocess=0.6.0=py36_0
- py-boost=1.65.1=py36hf484d3e_4
- pycparser=2.19=py36_0
- pygments=2.2.0=py36_0
- pyopenssl=18.0.0=py36_0
- pyparsing=2.3.0=py36_0
- pyqt=5.9.2=py36h05f1152_2
- pysocks=1.6.8=py36_0
- pyzmq=17.1.2=py36h14c3975_0
- qt=5.9.7=h5867ecd_1
- qtconsole=4.4.3=py36_0
- requests=2.20.1=py36_0
- s3transfer=0.1.13=py36_0
- scikit-learn=0.20.1=py36h4989274_0
- scipy=1.1.0=py36hfa4b5c9_1
- send2trash=1.5.0=py36_0
- sip=4.19.8=py36hf484d3e_0
- smart_open=1.7.1=py36_0
- terminado=0.8.1=py36_1
- testpath=0.4.2=py36_0
- tornado=5.1.1=py36h7b6447c_0
- tqdm=4.28.1=py36h28b3542_0
- traitlets=4.3.2=py36_0
- urllib3=1.23=py36_0
- wcwidth=0.1.7=py36_0
- webencodings=0.5.1=py36_1
- widgetsnbextension=3.4.2=py36_0
- zeromq=4.2.5=hf484d3e_1
- pip:
- absl-py==0.6.1
- astor==0.7.1
- biovec==0.2.4
- bz2file==0.98
- docopt==0.6.2
- gast==0.2.0
- grpcio==1.17.1
- h5py==2.8.0
- imbalanced-learn==0.4.3
- imblearn==0.0
- jsonpickle==0.9.6
- keras==2.2.4
- keras-applications==1.0.6
- keras-preprocessing==1.0.5
- markdown==3.0.1
- git+https://github.com/samoturk/mol2vec
- munch==2.3.2
- protobuf==3.6.1
- py-cpuinfo==4.0.0
- pyfasta==0.5.2
- pymongo==3.7.2
- pyyaml==3.13
- sacred==0.7.4
- seaborn==0.9.0
- sklearn==0.0
- termcolor==1.1.0
prefix: /cta/users/hbilgin/.conda/envs/dta_pred