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DESCRIPTION
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Package: BiGGR
Type: Package
Title: Constraint based modeling in R using metabolic reconstruction databases
Version: 1.19.1
Date: 2019-04-10
Author: Anand K. Gavai, Hannes Hettling
Maintainer: Anand K. Gavai <[email protected]>, Hannes
Hettling <[email protected]>
Depends: R (>= 2.14.0), rsbml, hyperdraw, LIM,stringr
Imports: hypergraph, limSolve
Description: This package provides an interface to simulate metabolic
reconstruction from the BiGG database(http://bigg.ucsd.edu/)
and other metabolic reconstruction databases. The package facilitates
flux balance analysis (FBA) and the sampling of feasible flux
distributions. Metabolic networks and estimated fluxes can be
visualized with hypergraphs.
License: file LICENSE
URL: http://www.bioconductor.org/
Copyright: see inst/COPYRIGHTS for the license of the BiGG database
LazyLoad: yes
biocViews: Systems Biology,Pathway,Network,GraphAndNetwork, Visualization,Metabolomics