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.gitignore
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## File: .gitignore
## Purpose: Specifies untracked files for git to ignore
## Some from http://help.github.com/ignore-files/
## and added R/latex/emacs/RStudio specific etc
## Note: 1) goes in root of project and is NOT stored with git repo
## 2) you may wish to add some files which are excluded here like
## something.log or somthing.pdf. Simply use 'git add filename'
## which will track specified file. Alternatively, comment the
## pattern(s) below
## 3) you may wish to allow certain files like pdfs or docs in
## subdirectories. To allow a pattern in a specific subdirectory
## then create a .gitignore file in that directory using a text
## editor and use negate (!). See 'man gitignore'
########################################################
# R output #
########################################################
*.Rhistory
*.Rout
*_Rout.txt
Rplots.pdf
*.pdf
*.tiff
*.jpg
*.jpeg
##########################
# Packages/zip/iso files #
##########################
# it's better to unpack these files and commit the raw source
# git has its own built in compression methods
*.7z
*.dmg
*.gz
*.iso
*.jar
*.rar
*.tar
*.zip
#############
# Databases #
#############
*.sql
*.sqlite
#############
# latex #
#############
*.aux
*.glo
*.idx
*.log
*.toc
*.ist
*.acn
*.acr
*.alg
*.bbl
*.blg
*.dvi
*.glg
*.gls
*.ilg
*.ind
*.lof
*.lot
*.maf
*.mtc
*.mtc1
*.out
*.synctex.gz
*.pdfsync
*.nav
*.snm
#############
# latexmk #
#############
*.fdb_latexmk
*.fls
##################
# C object files
##################
*.o
*.so
##################
# RStudio files
##################
*.Rproj.user
*.DS_Store