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Package stats #39

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jakebeal opened this issue Aug 6, 2021 · 6 comments
Closed

Package stats #39

jakebeal opened this issue Aug 6, 2021 · 6 comments
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automation GitHub action automation work good first issue Good for newcomers

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@jakebeal
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jakebeal commented Aug 6, 2021

For each package, we should be able to collect and record stats for its contents, including:

  • number of unique parts
  • classes of parts
  • number of plasmids used
  • number of parts per organism
  • number of part/backbone combinations (i.e., wells required)
  • types of organisms targeted by the package
  • issues in the package

Put all of this into an automatically generated README file for the package

We should also do this for the top-level "complete distribution package", which will necessarily have duplicates that get unioned.

@jakebeal
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This should also include a list of the unused parts in the directory, though that will require some resolution of #75

@jakebeal
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Remove this from end-to-end automation because #76 provides a sufficient amount for the initial end-to-end enablement of orders, but there's more to be done in this issue.

@jakebeal jakebeal added the good first issue Good for newcomers label Sep 8, 2021
@jakebeal
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jakebeal commented Sep 13, 2021

#101 addresses everything at the package level except for organism information, which we'll consider later.
Still todo: put similar information in at the whole-distribution level

@noahsprent
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@jakebeal Would it be reasonable to split this into two separate issues. One for generating a summary of organism information at the package level, and a second for generating this summary for the whole distribution? I see that there is at least 'n samples planned for distribution' at the whole-distribution level currently.

@jakebeal
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I believe the package level is complete, so we should probably just have a new issue for the whole-distribution level, so it's less confusing what needs to be done.

@noahsprent
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Ok, I've created that issue: #320

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Labels
automation GitHub action automation work good first issue Good for newcomers
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