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Data availabilty extraction failure use cases #1187

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lfoppiano opened this issue Oct 23, 2024 · 2 comments
Open

Data availabilty extraction failure use cases #1187

lfoppiano opened this issue Oct 23, 2024 · 2 comments
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error cases Some error/test case for future improvements implemented The issue has been implemented models:segmentation
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0.8.2

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lfoppiano commented Oct 23, 2024 •
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In this case the noisy footers are wrongly captured in the DAs.

<div type="availability">
                <div
                    xmlns="http://www.tei-c.org/ns/1.0">
                    <head>DATA AVAILABILITY</head>
                    <p>The genome assembly was uploaded to NCBI Genbank under the project number PRJNA1075679, with the genome accession number JBAGRT000000000. Research Article Microbiology Spectrum October 2024 Volume 12 Issue 10 10.1128/spectrum.00751-24 9 Downloaded from 
                        <ref type="url" target="https://journals.asm.org/journal/spectrum">https://journals.asm.org/journal/spectrum</ref> on 10 October 2024 by 2a01:e0a:d12:4600:6f65:dae8:67:55e1.
                    </p>
                </div>
            </div>

PDF (CC-BY): 3_10.1128_spectrum.00751-24.pdf
@lfoppiano lfoppiano added the error cases Some error/test case for future improvements label Oct 23, 2024
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Another example, the DAs is truncated by the page change

image 
        <div type="availability">
                <div
                    xmlns="http://www.tei-c.org/ns/1.0">
                    <head>DATA AVAILABILITY</head>
                    <p>Data was provided and stored by MOH and CIHI as above. The dataset from this study is held securely in coded form at ICES. While legal data sharing agreements between ICES and data providers (e.g., healthcare organizations and government) prohibit ICES from making the dataset publicly available, access may be granted to those who meet</p>
                </div>
            </div>

PDF (CC-BY): 4_10.1128_spectrum.02630-23.pdf

@lfoppiano lfoppiano mentioned this issue Nov 13, 2024
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Here two more cases from nature:

@lfoppiano lfoppiano self-assigned this Nov 14, 2024
@lfoppiano lfoppiano added this to the 0.8.2 milestone Nov 28, 2024
@lfoppiano lfoppiano added the implemented The issue has been implemented label Dec 11, 2024
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