diff --git a/chrombpnet/helpers/make_gc_matched_negatives/get_genomewide_gc_buckets/get_genomewide_gc_bins.py b/chrombpnet/helpers/make_gc_matched_negatives/get_genomewide_gc_buckets/get_genomewide_gc_bins.py index 8eea53c2..b8d51f3f 100644 --- a/chrombpnet/helpers/make_gc_matched_negatives/get_genomewide_gc_buckets/get_genomewide_gc_bins.py +++ b/chrombpnet/helpers/make_gc_matched_negatives/get_genomewide_gc_buckets/get_genomewide_gc_bins.py @@ -27,7 +27,7 @@ def get_genomewide_gc(genome_fa, outf, width, stride): 3000-4000 and delete 1000-2000. And repeat. """ - f = pyfaidx.Fasta(genome_fa, as_raw=True) + f = pyfaidx.Fasta(genome_fa, as_raw=True, rebuild=False) outf = open(outf, 'w') div = width//stride