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0.5.2-beta

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@dancooke dancooke released this 29 Oct 14:48
· 1458 commits to master since this release

This is a minor release with some bug fixes, and improvements to installation scripts.

Improvements

  • Makes RFQUAL a FORMAT field rather than an INFO field, so each sample gets an RFQUAL. [81b75ea]
  • Installation can now be to any location. Resolves #36. [18b36ea]
  • Installation script can now be given htslib root location. Resolves #38. [93ba000]
  • Installation script now tries both cmake3 and cmake. Resolves #37. [30a3ffb]
  • Installation script now properly downloads provided random forests. [3599999]

Bug fixes

  • Fixes bug in htslib float field extraction that could corrupt FORMAT and INFO values. [0078c5a]
  • Fixes bug in the de novo mutation model that could lead to segmentation faults. [7d945f8, ad996a2]
  • Fixes bug that causes conflicting call exception due to calling variants in skipped regions. [01477d9]
  • Fixes bug in de novo contamination measure that could cause segmentation faults. [f2e6610]