docker-compose.yml

version: "3.0"
services:
  postgres:
    image: postgres:15-alpine
    environment:
    - POSTGRES_USER=postgres
    - POSTGRES_PASSWORD=postgres
    - POSTGRES_DB=postgres
    ports:
    - "5432:5432"
    volumes:
    - ./psql_data:/var/lib/postgresql/data
    - ./.docker/initdb.sql:/docker-entrypoint-initdb.d/initdb.sql
    command: -c 'shared_buffers=256MB' -c 'max_locks_per_transaction=1024'
    healthcheck:
      test: ["CMD-SHELL", "pg_isready -U $$POSTGRES_USER"]
      interval: 5s
      timeout: 60s
      retries: 5
  emx2:
    image: molgenis/molgenis-emx2
    environment:
    - MOLGENIS_POSTGRES_URI=jdbc:postgresql://postgres/molgenis
    - MOLGENIS_POSTGRES_USER=molgenis
    - MOLGENIS_POSTGRES_PASS=molgenis
    #      - MOLGENIS_OIDC_CLIENT_ID=[]
    #      - MOLGENIS_OIDC_CLIENT_SECRET=[]
    #      - MOLGENIS_OIDC_CLIENT_NAME=MolgenisAuth
    #      - MOLGENIS_OIDC_DISCOVERY_URI=https://auth.molgenis.org/.well-known/openid-configuration/
    #      - MOLGENIS_OIDC_CALLBACK_URL=http://localhost:8080
    ports:
    - "8080:8080"
    depends_on:
      postgres:
        condition: service_healthy
    restart: on-failure
  ssr-catalogue:
    image: molgenis/ssr-catalogue
    ports:
    - "3000:3000"