From 6200d8dba97c12aecdd49f2c7c6fcf0c94fef904 Mon Sep 17 00:00:00 2001 From: david-bouyssie Date: Tue, 29 Nov 2016 13:43:36 +0100 Subject: [PATCH] Update README.md --- README.md | 3 +++ 1 file changed, 3 insertions(+) diff --git a/README.md b/README.md index d87c2513..9fcc3a20 100644 --- a/README.md +++ b/README.md @@ -97,6 +97,9 @@ Open a command line window in the directory containing raw2mzdb.exe then type: **raw2mzdb.exe -i \ -o \** +Example: +**raw2mzdb.exe -i "D:\myfile.raw" -o "D:\myfile.mzDB"** + By defaut, the raw file will be converted in the "fitted" mode for the MS1 (MS2 is often in centroid mode and can not be converted in fitted mode). If the MS2 (or superior) are acquired in high resolution (i.e in profile mode), you could specify that you want to convert specific MS levels in the required mode: **raw2mzdb.exe -i \ -o \ -f 1-2** will try to convert MS and MS/MS spectra in fitted mode.