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input reads for dorado polish Q #1225

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bruzecruise opened this issue Jan 21, 2025 · 1 comment
Open

input reads for dorado polish Q #1225

bruzecruise opened this issue Jan 21, 2025 · 1 comment
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polish Issues related to polishing question Issue is a question

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@bruzecruise
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HI I want to polish an assembly I made with hifiasm --ont using ONT reads filtered to Q10 and Length 500. Should I polish with the same identical filtered read set or do you recommend using all the reads?

Thanks!
Dan
@HalfPhoton
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Hi @bruzecruise,
This question is best asked on the Nanopore Community Forum

Kind regards,
Rich

@HalfPhoton HalfPhoton added question Issue is a question polish Issues related to polishing labels Jan 23, 2025
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@bruzecruise @HalfPhoton