From 7f4b80b980081f3aefbd4bcb84373b5c2c2cbc4a Mon Sep 17 00:00:00 2001 From: naumenko-sa Date: Fri, 22 Jun 2018 21:46:21 -0400 Subject: [PATCH] new file: bcbio.parallel.sh --- bcbio.parallel.sh | 3 +++ 1 file changed, 3 insertions(+) create mode 100755 bcbio.parallel.sh diff --git a/bcbio.parallel.sh b/bcbio.parallel.sh new file mode 100755 index 0000000..efe331f --- /dev/null +++ b/bcbio.parallel.sh @@ -0,0 +1,3 @@ +#!/bin/bash + +bcbio_nextgen.py ../config/c4r_multisample.yaml -t ipython -n 800 -s torque -q parallel_long -r walltime=200:00:00 -r vmem=50G --timeout 600 -r minconcores=2