From a587f18e613029070d6c1c5ad4320bb13bda7e4f Mon Sep 17 00:00:00 2001
From: Jennifer Chang <jennifer.chang.bioinform@gmail.com>
Date: Thu, 12 Sep 2024 15:07:42 -0700
Subject: [PATCH] Update RKI_INDEX_COL since SEQUENCE.ID renamed to igs_id

---
 bin/transform-rki-data-to-ndjson | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/bin/transform-rki-data-to-ndjson b/bin/transform-rki-data-to-ndjson
index e860a126..7d943686 100755
--- a/bin/transform-rki-data-to-ndjson
+++ b/bin/transform-rki-data-to-ndjson
@@ -5,7 +5,7 @@ Turn RKI files into ndjson format
 
 import typer
 
-RKI_INDEX_COL = "SEQUENCE.ID"
+RKI_INDEX_COL = "igs_id"
 
 def main(
     input_rki_sequences: str = typer.Option(..., help="Input file"),