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SCOPData Deprecated in Latest Biopython #92

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mnoyes68 opened this issue Aug 13, 2024 · 0 comments
Open

SCOPData Deprecated in Latest Biopython #92

mnoyes68 opened this issue Aug 13, 2024 · 0 comments

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@mnoyes68
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When installing the AlphaFold environment via the af2_binder_design.yml file, the error below was thrown through the import test. This was caused by the environment using Biopython version 1.84, where SCOPData is deprecated. This was resolved by switching to Biopython version 1.81, this should be pinned in the env file.

ImportError: cannot import name 'SCOPData' from 'Bio.Data'
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@mnoyes68