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pom.xml
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<project xmlns="http://maven.apache.org/POM/4.0.0"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<!-- one-liner to take you to the cloud with settings form the application.yaml file: -->
<!-- 'mvn clean package com.google.cloud.tools:jib-maven-plugin:dockerBuild -Dimage=distroless-hapi && docker run -p 8080:8080 -e spring.batch.job.enabled=false distroless-hapi' -->
<!--
Note: HAPI projects use the "hapi-fhir" POM as their base to provide easy management.
You do not need to use this in your own projects, so the "parent" tag and it's
contents below may be removed
if you are using this file as a basis for your own project.
-->
<parent>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-parent</artifactId>
<version>2.7.1</version>
</parent>
<modules>
<module>hapipheno-client</module>
<module>hapipheno-core</module>
</modules>
<groupId>org.phenopackets.hapipheno</groupId>
<artifactId>parent</artifactId>
<version>0.4.2-SNAPSHOT</version>
<packaging>pom</packaging>
<properties>
<java.version>11</java.version>
<spring_boot_version>2.3.4.RELEASE</spring_boot_version>
<hapi.version>6.4.1</hapi.version>
<protobuf.version>3.16.1</protobuf.version>
<phenopacket.schema.version>2.0.2</phenopacket.schema.version>
<springboot.starter.version>2.7.2</springboot.starter.version>
</properties>
<repositories>
<repository>
<id>oss</id>
<snapshots>
<enabled>true</enabled>
</snapshots>
<url>https://oss.sonatype.org/content/repositories/snapshots</url>
</repository>
</repositories>
<distributionManagement>
<snapshotRepository>
<id>oss</id>
<url>https://oss.sonatype.org/content/repositories/snapshots/</url>
</snapshotRepository>
</distributionManagement>
<licenses>
<license>
<name>The 3-Clause BSD License</name>
<url>https://opensource.org/licenses/BSD-3-Clause</url>
<distribution>repo</distribution>
</license>
</licenses>
<developers>
<developer>
<name>Peter Robinson</name>
<email>[email protected]</email>
<organization>The Jackson Laboratory</organization>
<organizationUrl>https://www.jax.org/</organizationUrl>
</developer>
<developer>
<name>Shahim Essaid</name>
<email>[email protected]</email>
<organization>University of Colorad Anschutz Medical Campus</organization>
<organizationUrl>http://medschool.cuanschutz.edu/dbmi</organizationUrl>
</developer>
<developer>
<name>Christophe Roeder</name>
<email>[email protected]</email>
<organization>University of Colorad Anschutz Medical Campus</organization>
<organizationUrl>http://medschool.cuanschutz.edu/dbmi</organizationUrl>
</developer>
</developers>
<dependencyManagement>
<dependencies>
<!-- This dependency includes the core HAPI-FHIR classes -->
<dependency>
<groupId>ca.uhn.hapi.fhir</groupId>
<artifactId>hapi-fhir-client</artifactId>
<version>${hapi.version}</version>
</dependency>
<dependency>
<groupId>ca.uhn.hapi.fhir</groupId>
<artifactId>hapi-fhir-validation</artifactId>
<version>${hapi.version}</version>
</dependency>
<dependency>
<groupId>ca.uhn.hapi.fhir</groupId>
<artifactId>hapi-fhir-validation-resources-r4</artifactId>
<version>${hapi.version}</version>
</dependency>
<dependency>
<groupId>ca.uhn.hapi.fhir</groupId>
<artifactId>hapi-fhir-structures-r4</artifactId>
<version>${hapi.version}</version>
</dependency>
<dependency>
<groupId>ca.uhn.hapi.fhir</groupId>
<artifactId>hapi-fhir-server</artifactId>
<version>${hapi.version}</version>
</dependency>
<dependency>
<groupId>org.phenopackets</groupId>
<artifactId>phenopacket-schema</artifactId>
<version>${phenopacket.schema.version}</version>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter</artifactId>
<version>${springboot.starter.version}</version>
</dependency>
<dependency>
<groupId>com.google.protobuf</groupId>
<artifactId>protobuf-java</artifactId>
<version>${protobuf.version}</version>
</dependency>
<dependency>
<groupId>com.google.protobuf</groupId>
<artifactId>protobuf-java-util</artifactId>
<version>${protobuf.version}</version>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-test</artifactId>
<version>${springboot.starter.version}</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.junit.jupiter</groupId>
<artifactId>junit-jupiter-engine</artifactId>
<version>5.9.0</version>
</dependency>
</dependencies>
</dependencyManagement>
<dependencies>
<dependency>
<groupId>org.slf4j</groupId>
<artifactId>slf4j-api</artifactId>
<version>1.7.2</version>
</dependency>
</dependencies>
<build>
<resources>
<resource>
<directory>src/main/resources</directory>
<filtering>false</filtering>
</resource>
</resources>
<plugins>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-source-plugin</artifactId>
<version>3.2.1</version>
<executions>
<execution>
<id>attach-sources</id>
<phase>verify</phase>
<goals>
<goal>jar-no-fork</goal>
</goals>
</execution>
</executions>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-failsafe-plugin</artifactId>
<version>3.0.0-M5</version>
<executions>
<!-- Invokes both the integration-test and the verify goals of the Failsafe Maven
plugin -->
<execution>
<id>integration-tests</id>
<goals>
<goal>integration-test</goal>
<goal>verify</goal>
</goals>
<configuration>
<!-- Skips integration tests if the value of skip.integration.tests property
is true -->
<includes>
<include>**/ExternalPropertyFileLoaderIntegrationTest.java</include>
</includes>
</configuration>
</execution>
</executions>
</plugin>
</plugins>
</build>
</project>