JBrowse track meta-issue

[kimrutherford]

This is a tracking issue for all missing or new JBrowse data. I've added what I think are the corresponding issue so I know which is which.

- Gagneur/Eser #50
- variation data (then everything 'old and visible in ensembl' is hosted) - #729 hosted

• Update DNA binding motif file Update TF binding site motif track to include new TF binding motifs #802
  - Li TSS promoter locations Li TSS track data PMID: 25747261 #736 add Li TSS track(s)? PMID:25747261 #735
  - Dutrow ncRNA browser track for Dutrow UTR/ncRNA dataset #63
  - Lanterman ncRNA browser track for Lantermann UTR/ncRNA dataset #62
  - promoter collection promoter collection #1185
  - Gerry data Gerry data #1198
  - Juan ribosome profiling browser dataset ribosome profiling #1245

[Antonialock]

Next announcement:

Announced tracks:

• Mickle, Segurado, Hayashi Mickle, Segurado, Hayashi #1388
• Dan Jeffares transposon mutagenesis (etc) data - Jeffares hermes transposon insertion data, nucleosome data and HMM model data #767
• Angad Garg Browser data set , Garg GSE60712 #768
• González/Antequera data sets González/Antequera data sets #1023
• Jurgs new data Atkinson et al 2018 transcript tracks #898
• Promoter elements (bed file) promoter elements bed file #774
• Yadav SIDD data (bed file) JBrowse SIDD G(x) data from Yadav and Dubey #773 - now live but needs feature labels
• Thodberg data - browser track for TSS atlas identified by CAGE (Olaf) #368
• intron data - Intron branch point data #728

[ValWood]

double check which of these datasets were announced because for some that are listed as announce I put them in my new ticket for hosting (I did not know about this one)

#1441

[ValWood]

replaced by
#1441