From 3148cb797e5d657b66f9075b46d882afe9311389 Mon Sep 17 00:00:00 2001 From: silastittes Date: Mon, 1 Jul 2024 13:41:54 -0700 Subject: [PATCH] more time for stairway plot --- workflows/n_t.snake | 5 +++-- 1 file changed, 3 insertions(+), 2 deletions(-) diff --git a/workflows/n_t.snake b/workflows/n_t.snake index 94069be..df6e7d1 100644 --- a/workflows/n_t.snake +++ b/workflows/n_t.snake @@ -220,7 +220,7 @@ rule run_stairwayplot: output_dir + "/inference/{demog}/stairwayplot/{dfes}/{annots}/{seeds}/{pops}/stairwayplot_estimated_Ne.txt" threads: 20 resources: - time = 1_000, + time = 2_000, mem_mb=120_000, run: inputs = expand( @@ -317,7 +317,8 @@ rule ts_to_multihep: output_dir + "/simulated_data/{demog}/{dfes}/{annots}/{seeds}/sim_{chrms}.trees" output: output_dir + "/inference/{demog}/msmc/{dfes}/{annots}/{seeds}/{pops}/{chrms}.trees.multihep.txt" - + resources: + time=2_000, run: print(input[0], num_sampled_genomes_msmc, mask_file) if wildcards.annots == "none" or msmc_mask == "none":