README.md

DRPreter (Drug Response PREdictor and interpreTER)

DRPreter: Interpretable Anticancer Drug Response Prediction Using Knowledge-Guided Graph Neural Networks and Transformer

1. Create cell-line data

python3 cellline_graph.py

2. Create drug data

python3 drug_graph.py

3. Train a model

python3 main.py --mode train

4. Interpret model with trained model

python3 main.py --mode test --seed 0