README.md

wrabbit

Library for creating wrapper applications for Nextflow apps compatible with any Seven Bridges powered platform.

Installation

wrabbit needs Python 3.7 or later

Install latest release on pypi

pip install wrabbit

Install latest (unreleased) code

pip install git+https://github.com/rabix/wrabbit.git

Nextflow parser

from wrabbit.parser.nextflow import NextflowParser

workflow_path = '/path/to/app-directory'
parsed_nextflow = NextflowParser(workflow_path)