From 2c52ed43e0bac662144c5dfa280ff5580dcfd0b1 Mon Sep 17 00:00:00 2001 From: ashuaibi7 Date: Sun, 12 Jan 2025 13:02:56 -0500 Subject: [PATCH] modified function statement for simulate evaluate method and usage in main --- src/dialect/__main__.py | 6 +++++- src/dialect/utils/simulate.py | 2 +- 2 files changed, 6 insertions(+), 2 deletions(-) diff --git a/src/dialect/__main__.py b/src/dialect/__main__.py index f4527eb..1f417ed 100644 --- a/src/dialect/__main__.py +++ b/src/dialect/__main__.py @@ -73,7 +73,11 @@ def main(): else: # args.mode == "evaluate" logging.info("Evaluating methods on simulated data") if args.type == "single": - evaluate_single_gene_simulation() + evaluate_single_gene_simulation( + params=args.params, + data=args.data, + out=args.out, + ) else: # args.type == "pair" logging.info("Evaluating methods on simulated data for a pair of genes") raise NotImplementedError diff --git a/src/dialect/utils/simulate.py b/src/dialect/utils/simulate.py index 893450e..5c32191 100644 --- a/src/dialect/utils/simulate.py +++ b/src/dialect/utils/simulate.py @@ -293,6 +293,6 @@ def create_single_gene_simulation( # ---------------------------------------------------------------------------- # # SIMULATION EVALUATION MAIN FUNCTIONS # # ---------------------------------------------------------------------------- # -def evaluate_single_gene_simulation(): +def evaluate_single_gene_simulation(params, data, out): logging.info("Evaluating DIALECT on simulated data for a single gene") raise NotImplementedError