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RuntimeError in pickling #3

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Rdk0 opened this issue Nov 21, 2020 · 2 comments
Open

RuntimeError in pickling #3

Rdk0 opened this issue Nov 21, 2020 · 2 comments

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@Rdk0
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Rdk0 commented Nov 21, 2020

Hi Taka,
Thank you very much for sharing the code. I am running into this problem:
dataprep.py", line 65, in main
pickle.dump(library, file, protocol=pickle.HIGHEST_PROTOCOL)
RuntimeError: Pickling of "rdkit.Chem.rdSubstructLibrary.SubstructLibrary" instances is not enabled (http://www.boost.org/libs/python/doc/v2/pickle.html)
Best regards,
Rad.
@iwatobipen
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Hi Rdk0,
Thanks for opening. Could you please provide more details of information of your env?
version of RDKit, python etc...
Thanks!

@Rdk0
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Rdk0 commented Dec 12, 2020

Hi iwatobipen,
Pop!_OS_20.10
RDKit Version: 2018.09.1
python Version: Python 3.6.12 |Anaconda, Inc.
pickle 4.0
thank you.

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@iwatobipen @Rdk0