diff --git a/DESCRIPTION b/DESCRIPTION index e678d3c..6946737 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -28,3 +28,4 @@ Config/testthat/edition: 3 Encoding: UTF-8 LazyData: TRUE RoxygenNote: 7.3.2 +Roxygen: list(markdown = TRUE) diff --git a/man/cpp11bigwig-package.Rd b/man/cpp11bigwig-package.Rd index c2c9e79..914a55a 100644 --- a/man/cpp11bigwig-package.Rd +++ b/man/cpp11bigwig-package.Rd @@ -10,7 +10,7 @@ bigwig provides methods to read data from bigWig files. bigwig uses cpp11 to wrap libBigWig from @dpryan79. } \details{ - +\url{https://github.com/dpryan79/libBigWig} } \seealso{ Useful links: @@ -22,6 +22,6 @@ Useful links: } \author{ -Jay Hesselberth +Jay Hesselberth \href{mailto:jay.hesselberth@gmail.com}{jay.hesselberth@gmail.com} } \keyword{internal} diff --git a/man/read_bigwig.Rd b/man/read_bigwig.Rd index 4f04924..480f689 100644 --- a/man/read_bigwig.Rd +++ b/man/read_bigwig.Rd @@ -16,7 +16,7 @@ read_bigwig(bwfile, chrom = NULL, start = NULL, end = NULL, as = NULL) \item{end}{end position for data} \item{as}{return data as a specific type. -The default is a tibble (`tbl`) or GRanges (`gr`)} +The default is a tibble (\code{tbl}) or GRanges (\code{gr})} } \value{ \code{tibble}