lc.conf

# Config and validation file for Enrico, PASS8
# =========================================================
#
# Besides providing default options it is also used
# to check the user config file.
# Options without default options here must be
# specified in the user config file

# Folder where the output will be stored
out = /home/fermi/LAT_day02/lc
# verbosity
verbose = yes
#Overwrite existing output files. Use with caution
clobber = yes
#Submit the job to a cluster?
Submit = no

[target]
	name = 3C279
	ra = 193.98
	dec = -5.82
	redshift = 0.0
	spectrum = PowerLaw
	ebl_model = 4
	# 0=Kneiske, 1=Primack05, 2=Kneiske_HighUV, 3=Stecker05, 4=Franceschini, 5=Finke, 6=Gilmore
	fit_tau = yes

[space]
	xref = 193.98
	yref = -5.82
	rad = 10.0
	binsz = 0.1
	coordsys = CEL
	proj = AIT
	phibins = 0

[file]
	spacecraft = /home/fermi/LAT_day02/data/3c279_SC00.fits
	event = /home/fermi/LAT_day02/data/3c279_PH00.fits
	xml = /home/fermi/LAT_day02/lc/3C279_PowerLaw_model.xml
	tag = 3C279
	# If specified, reuse a previously generated livetime cube.
	# Useful for speeding up batch analysis of several sources carried out
	# with the same parameters.
	ltcube = ""

[time]
	tmin = 455328003
	tmax = 456451203
	file = ""
	type = MET

[energy]
	emin = 100.0
	emax = 300000.0
	enumbins_per_decade = 10

[event]
	irfs = CALDB
	evclass = 128
	evtype = 3

[analysis]
	zmax = 100
	# General analysis options
	likelihood = binned
	ComputeDiffrsp = yes
	roicut = no
	filter = (DATA_QUAL>0)&&(LAT_CONFIG==1)

[environ]
	# Analysis environment configuration
	# Can also be done via shell environment variables
	FERMI_DATA_DIR = ""
	FERMI_CATALOG_DIR = ""
	FERMI_CATALOG = ""
	FERMI_DIFFUSE_DIR = ""
	FERMI_PREPROCESSED_DIR = ""

[fitting]
	optimizer = MINUIT
	ftol = 1e-06

[model]
	# The following options determine the xml model
	diffuse_gal_dir = ""
	diffuse_iso_dir = ""
	diffuse_gal = ""
	diffuse_iso = ""
	# user points sources for diffuse catalog sources
	# freeze spectral parameters for weak and far away sources:
	min_significance = 4.0
	max_radius = 3.0


[Spectrum]
	#Generates fits files or not?
	FitsGeneration = yes
	#Generates plots (SED, model map)
	ResultPlots = yes
	#Freeze the spectral index of the source. Has no implication if 0 (Left free to vary)
	FrozenSpectralIndex = 0.0
	#Use the summed likelihood method
	SummedLike = no


[UpperLimit]
	#Assumed Spectral index
	SpectralIndex = 1.5
	# UL method could be Profile or Integral (provided by the fermi collaboration). 
	#Poisson is base on the Feldman-Cousins method for low signal. Only 95 % yet available
	Method = Profile
	envelope = no
	#Compute an UL if the TS of the sources is <TSlimit
	TSlimit = 25.0
	# Confidence level for the Ul computation
	cl = 0.95

[LightCurve]
	#Generates fits files or not?
	FitsGeneration = yes
	#Number of points for the LC
	NLCbin = 13
	#Index for the power law. Left free to vary if 0
	SpectralIndex = 2.0
	MakeConfFile = yes
	#Compute Variability index as in the 2FGL. 
	ComputeVarIndex = yes
	#Compute an UL if the TS of the sources is <TSLightCurve
	TSLightCurve = 9.0
	#Generates control plots
	DiagnosticPlots = yes


[FoldedLC]
	#Number of bins for the orbitally folded LC
	NLCbin = 10
	#Epoch of phase=0 in MJD, equal to tmin is 0
	epoch = 0.0
	#Orbital period in days
	Period = 0.0


[AppLC]
	#Generates fits files or not?
	FitsGeneration = yes
	#Spectral index for the exposure calculation
	index = 1.5
	#Number of bins
	NLCbin = 10
	#bin form data or frozen bin size
	binsFromData = no



[Ebin]
	#Generates fits files or not?
	FitsGeneration = yes
	NumEnergyBins = 0
	#Compute an UL if the TS of the sources is <TSEnergyBins
	TSEnergyBins = 9.0

[TSMap]
	#Re-fit before computing the TS map
	Re-Fit = no
	#Numbers of pixel in x and y
	npix = 100
	#Remove or not the target from the model
	RemoveTarget = no
	#Generate the TS map pixel by pixel or by grouping the pixels by row.
	#(reduce the numbers of jobs but each job is longer)
	method = row

[findsrc]
	#Generates fits files or not?
	FitsGeneration = yes
	#Reoptimize before
	Refit = yes

[srcprob]
	#Generates fits files or not?
	FitsGeneration = yes
	#radius for the computation
	rad = 1.0
	# list of sources 
	srclist = ""
	# number of photons to print
	numberPhoton = 10

[Contours]
	parname1 = Prefactor
	parname2 = Index