diff --git a/DESCRIPTION b/DESCRIPTION index 2eb77164c..d53ab9e81 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -14,7 +14,7 @@ Authors@R: c( person(given = 'Patrick', family = 'Roelli', email = 'proelli@nygenome.org', role = 'ctb'), person(given = "Yuhan", family = "Hao", email = 'yhao@nygenome.org', role = 'ctb', comment = c(ORCID = '0000-0002-1810-0822')) ) -URL: https://www.satijalab.org/seurat, https://github.com/satijalab/seurat +URL: https://satijalab.org/seurat, https://github.com/satijalab/seurat BugReports: https://github.com/satijalab/seurat/issues Additional_repositories: https://mojaveazure.github.io/loomR Depends: diff --git a/R/data.R b/R/data.R index e4a14eeaa..be7eba463 100644 --- a/R/data.R +++ b/R/data.R @@ -39,7 +39,7 @@ #' \item{s.genes}{Genes associated with S-phase} #' \item{g2m.genes}{Genes associated with G2M-phase} #' } -#' @source \url{http://science.sciencemag.org/content/352/6282/189} +#' @source \url{https://science.sciencemag.org/content/352/6282/189} #' #' @seealso \code{\link{cc.genes}} #' diff --git a/R/utilities.R b/R/utilities.R index e459ce1af..f2b7b3ac3 100644 --- a/R/utilities.R +++ b/R/utilities.R @@ -970,7 +970,7 @@ FastRowScale <- function( #' where each entry is the current symbol found for each symbol provided and the #' names are the provided symbols. Otherwise, a named vector with the same information. #' -#' @source \url{https://www.genenames.org/} \url{https://rest.genenames.org/} +#' @source \url{https://www.genenames.org/} \url{https://www.genenames.org/help/rest/} #' #' @importFrom utils txtProgressBar setTxtProgressBar #' @importFrom httr GET accept_json timeout status_code content diff --git a/man/UpdateSymbolList.Rd b/man/UpdateSymbolList.Rd index 280034d2a..2d4a92893 100644 --- a/man/UpdateSymbolList.Rd +++ b/man/UpdateSymbolList.Rd @@ -5,7 +5,7 @@ \alias{GeneSymbolThesarus} \title{Get updated synonyms for gene symbols} \source{ -\url{https://www.genenames.org/} \url{https://rest.genenames.org/} +\url{https://www.genenames.org/} \url{https://www.genenames.org/help/rest/} } \usage{ GeneSymbolThesarus( diff --git a/man/cc.genes.updated.2019.Rd b/man/cc.genes.updated.2019.Rd index 377a91e6c..64f5dff4a 100644 --- a/man/cc.genes.updated.2019.Rd +++ b/man/cc.genes.updated.2019.Rd @@ -12,7 +12,7 @@ A list of two vectors } } \source{ -\url{http://science.sciencemag.org/content/352/6282/189} +\url{https://science.sciencemag.org/content/352/6282/189} } \usage{ cc.genes.updated.2019