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.github/workflows/ubuntu-builds.yml: fixing the name of the workflow

andrewdavidsmithpushed 2 commits to master • bf76df7…acc94f2 • 
on Oct 22, 2024

Adding ubuntu builds workflow

andrewdavidsmithpushed 1 commit to master • 431a062…bf76df7 • 
on Oct 21, 2024

src/load_data_for_complexity.hpp: making forgotten change to type of …

andrewdavidsmithpushed 1 commit to master • fb9b8e3…431a062 • 
on Oct 20, 2024

Deleted branch

andrewdavidsmithdeleted submodule-update • 
on Oct 20, 2024

Merge pull request #78 from smithlabcode/submodule-update

Pull request merge
andrewdavidsmithpushed 59 commits to master • 70666f4…fb9b8e3 • 
on Oct 20, 2024

.github/workflows/cppcheck.yml: found cppcheck

andrewdavidsmithpushed 1 commit to submodule-update • e4cc220…dbcf158 • 
on Oct 20, 2024

.github/workflows/cppcheck.yml: trying to find cppcheck

andrewdavidsmithpushed 1 commit to submodule-update • c1005a5…e4cc220 • 
on Oct 20, 2024

clang-format

andrewdavidsmithpushed 1 commit to submodule-update • d35eaf4…c1005a5 • 
on Oct 20, 2024

Removing the unused srand with pid and time because it was never used…

andrewdavidsmithpushed 1 commit to submodule-update • 402a67f…d35eaf4 • 
on Oct 20, 2024

only writing histograms to files and this is separate from verbose

andrewdavidsmithpushed 1 commit to submodule-update • afd38e7…402a67f • 
on Oct 20, 2024

cppcheck.yml: adding workflow for cppcheck

andrewdavidsmithpushed 1 commit to submodule-update • e1dee37…afd38e7 • 
on Oct 20, 2024

.cppcheck_suppress: adding newline before eof

andrewdavidsmithpushed 1 commit to submodule-update • 12c73b5…e1dee37 • 
on Oct 20, 2024

.github/workflows/cpplint.yml: removing the step of checking version

andrewdavidsmithpushed 5 commits to submodule-update • eda26a5…12c73b5 • 
on Oct 20, 2024

.cppcheck_suppress: adding a config file for cppcheck

andrewdavidsmithpushed 1 commit to submodule-update • 6b42ed7…eda26a5 • 
on Oct 20, 2024

Collapsing consecutive verbose conditions and factoring a big chunk o…

andrewdavidsmithpushed 1 commit to submodule-update • fd8fdd2…6b42ed7 • 
on Oct 20, 2024

src/continued_fraction.hpp: removing the return_degree function as it…

andrewdavidsmithpushed 3 commits to submodule-update • ea1ee85…fd8fdd2 • 
on Oct 20, 2024

src/to-mr.cpp: removing this file as its only remaining functionality…

andrewdavidsmithpushed 6 commits to submodule-update • d15c897…ea1ee85 • 
on Oct 20, 2024

src/load_data_for_complexity.cpp: removing some code that was aimed a…

andrewdavidsmithpushed 1 commit to submodule-update • 094584a…d15c897 • 
on Oct 19, 2024

src/load_data_for_complexity.cpp: fixed the priority queue which was …

andrewdavidsmithpushed 1 commit to submodule-update • 99edc6b…094584a • 
on Oct 19, 2024

src/lc_extrap.cpp: moving the report_histogram function to common

andrewdavidsmithpushed 5 commits to submodule-update • 197c9e5…99edc6b • 
on Oct 19, 2024

src/lc_extrap.cpp: adding code to format the histogram and write it t…

andrewdavidsmithpushed 2 commits to submodule-update • 7b38e63…197c9e5 • 
on Oct 19, 2024

src/smithlab_cpp: updating submodule

andrewdavidsmithpushed 1 commit to submodule-update • 6562e4a…7b38e63 • 
on Oct 19, 2024

src/load_data_for_complexity.cpp: fixing a bug in checking sorted ord…

andrewdavidsmithpushed 1 commit to submodule-update • 2b21984…6562e4a • 
on Oct 19, 2024

src/load_data_for_complexity.cpp: another bugfix related to checking …

andrewdavidsmithpushed 1 commit to submodule-update • 251d39f…2b21984 • 
on Oct 19, 2024

src/load_data_for_complexity.cpp: fixing a bug in checking whether a …

andrewdavidsmithpushed 1 commit to submodule-update • 0a94079…251d39f • 
on Oct 19, 2024

src/load_data_for_complexity.cpp: linting with cpplint

andrewdavidsmithpushed 1 commit to submodule-update • c72b53f…0a94079 • 
on Oct 19, 2024

src/load_data_for_complexity.cpp: factoring out sorted order check on…

andrewdavidsmithpushed 1 commit to submodule-update • 3245e62…c72b53f • 
on Oct 19, 2024

Adding threads for functions that read BAM input

andrewdavidsmithpushed 4 commits to submodule-update • d3454eb…3245e62 • 
on Oct 19, 2024

Formatting with clang-format and linting with cpplint

andrewdavidsmithpushed 1 commit to submodule-update • b6aaa24…d3454eb • 
on Oct 18, 2024

src/dnmt_error.hpp: adding this file because bam_record_utils.cpp nee…

andrewdavidsmithpushed 1 commit to submodule-update • 5c1483a…b6aaa24 • 
on Oct 18, 2024