diff --git a/data/easymsa.sh b/data/easymsa.sh index 67e2ee1..7bd6456 100644 --- a/data/easymsa.sh +++ b/data/easymsa.sh @@ -50,12 +50,13 @@ else fi fi -# shellcheck disable=SC2086 -"$MMSEQS" msa2lddt "${STRUCTUREDB}" "${RESULTS}_aa.fa" \ - "--lddt-html" "${RESULTS}.html" \ - "--guide-tree" "${RESULTS}.nw" \ - ${MSA2LDDT_PAR} \ - || fail "msa2lddt died" +if [ "${MAKE_REPORT}" ]; then + # shellcheck disable=SC2086 + "$MMSEQS" msa2lddtreport "${STRUCTUREDB}" "${RESULTS}_aa.fa" "${RESULTS}.html" \ + "--guide-tree" "${RESULTS}.nw" \ + ${MSA2LDDT_PAR} \ + || fail "msa2lddt died" +fi if [ -n "${REMOVE_TMP}" ]; then if [ -n "${GREEDY_BEST_HITS}" ]; then