All code developed for collaboration with Akbarian lab analyzing neural Hi-C data and its relevance to schizophrenia (SZ).
Majority of code is compatible with Juicer tools for Hi-C data analysis.
juicer.sh is modified from original AWS Juicer pipeline to run on LSF ghpcc cluster
All contributions, bug reports, bug fixes, and ideas are welcome!
Prashanth Rajarajan*, Tyler Borrman*, Will Liao*, et al. (2018). Neuron-specific signatures in the chromosomal connectome associated with schizophrenia risk. Science