From 013a66e11271e19352067cf66ce65420e58635f5 Mon Sep 17 00:00:00 2001 From: Chris Roeder <47036053+chrisroederucdenver@users.noreply.github.com> Date: Fri, 10 May 2024 11:58:27 -0600 Subject: [PATCH 1/2] UNC department and bio updates --- _members/anh-nguyen.md | 2 +- _members/anita-walden.md | 2 +- _members/anne-thessen.md | 2 +- _members/brandon-white.md | 2 +- _members/bryan-laraway.md | 6 +++--- _members/chris-roeder.md | 8 ++++---- _members/corey-cox.md | 4 ++-- _members/eric-hurwitz.md | 8 +++----- _members/evan-connelly.md | 4 ++-- _members/glass-elsarboukh.md | 4 ++-- _members/julie-mcmurry.md | 2 +- _members/kevin-schaper.md | 2 +- _members/matthew-brush.md | 2 +- _members/melissa-haendel.md | 5 ++--- _members/sabrina-toro.md | 2 +- _members/sarah-gehrke.md | 2 +- _members/shahim-essaid.md | 2 +- _members/shawn-oneil.md | 2 +- _members/tursynay-issabekova.md | 2 +- 19 files changed, 30 insertions(+), 33 deletions(-) diff --git a/_members/anh-nguyen.md b/_members/anh-nguyen.md index 36870cd..f7bb031 100644 --- a/_members/anh-nguyen.md +++ b/_members/anh-nguyen.md @@ -16,5 +16,5 @@ Anh is from the Bay Area and moved to Denver in late 2020. She studied Politica - San Jose State University ### Department +[University of North Carolina, Chapel Hill Department of Genetics](https://www.med.unc.edu/genetics) -[Department of Biomedical Informatics](https://medschool.cuanschutz.edu/dbmi) diff --git a/_members/anita-walden.md b/_members/anita-walden.md index 3b26b68..df1ccfb 100644 --- a/_members/anita-walden.md +++ b/_members/anita-walden.md @@ -12,4 +12,4 @@ She has expertise in clinical research informatics, HL7, standards, digital heal ### Department -[Department of Biomedical Informatics](https://medschool.cuanschutz.edu/dbmi) +[University of North Carolina, Chapel Hill Department of Genetics](https://www.med.unc.edu/genetics) diff --git a/_members/anne-thessen.md b/_members/anne-thessen.md index 2b02872..92434a1 100644 --- a/_members/anne-thessen.md +++ b/_members/anne-thessen.md @@ -20,4 +20,4 @@ She brings many years of environmental and biodiversity science experience to th ### Department -[Department of Biomedical Informatics](https://medschool.cuanschutz.edu/dbmi) \ No newline at end of file +[Department of Biomedical Informatics](https://medschool.cuanschutz.edu/dbmi) diff --git a/_members/brandon-white.md b/_members/brandon-white.md index 6f2a89f..e9a6c4d 100644 --- a/_members/brandon-white.md +++ b/_members/brandon-white.md @@ -15,4 +15,4 @@ Prior to joining TISLab, Brandon has worked in positions with both nonprofit and ### Department -[Department of Biomedical Informatics](https://medschool.cuanschutz.edu/dbmi) \ No newline at end of file +[University of North Carolina, Chapel Hill Department of Genetics](https://www.med.unc.edu/genetics) diff --git a/_members/bryan-laraway.md b/_members/bryan-laraway.md index 4f5cdd9..37f5534 100644 --- a/_members/bryan-laraway.md +++ b/_members/bryan-laraway.md @@ -8,13 +8,13 @@ links: linkedin: bryanlaraway --- -Bryan has training and experience in Molecular and Cellular Biology, Bioinformatics and Computational Biology, and Clinical Informatics, and is currently a Scientific Software Engineer with TISLab. He has a M.S. in Bioinformatics and Computational Biology from Oregon Health and Science University. +I'm a biomedical informatics researcher with interests in rare disease research and COVID research. Experienced in biological research, EHR data, OMOP, and utilizing our exciting tools on real world data (e.g. using semantic similarity to identify undiagnosed rare disease patients/patients with diseases lacking diagnostic codes in EHR data). ### Education - B.A. Biology, Reed College 2000 - M.S. Bioinformatics and Computational Biology, Oregon Health and Science University 2015 -### Departments +### Department -[Department of Biomedical Informatics](https://medschool.cuanschutz.edu/dbmi) \ No newline at end of file +[University of North Carolina, Chapel Hill Department of Genetics](https://www.med.unc.edu/genetics) diff --git a/_members/chris-roeder.md b/_members/chris-roeder.md index 6c295fc..a72b40b 100644 --- a/_members/chris-roeder.md +++ b/_members/chris-roeder.md @@ -8,13 +8,13 @@ links: linkedin: roederc --- -Chris is a software engineer and analyst with the TISLab. He contributes to TISlab, N3C and Cardiology projects as a developer and analyst involving clinical data (OMOP, FHIR) and terminologies. Enjoying expanding his reportoire with R and deeper SQL, he holds an MS in computer science and has past experience in commercial Java, SQL, C and Unix/Linux development. +My role in the TISlab is primarily as an SQL and Python developer in the N3C and CLAD ETL efforts, harmonizing data into OMOP. My previous work in Cardiology involved harmonizing and analyzing RCT and EHR data using R and various clustering algorithms. I have a past career in industry software development involving C, C++, Java, Perl, Javascript and others in UNIX/Linux environments. Summer weekends often see me on long bike rides and spending time with my wife. ### Education -- B.A. Math and Computer Science, University of Colorado, Boulder, 1988 -- M.S. Computer Science, University of Colorado, Denver, 2006 +- B.A. Math and Computer Science, University of Colorado, Boulder +- M.S. Computer Science, University of Colorado, Denver ### Department -[Department of Biomedical Informatics](https://medschool.cuanschutz.edu/dbmi) +[University of North Carolina, Chapel Hill Department of Genetics](https://www.med.unc.edu/genetics) diff --git a/_members/corey-cox.md b/_members/corey-cox.md index 343a6bd..088c21a 100644 --- a/_members/corey-cox.md +++ b/_members/corey-cox.md @@ -8,7 +8,7 @@ links: linkedin: corey-cox-7523a18 --- -Corey Cox is a biochemist, developer, and data scientist and is currently a Scientific Software Engineer for TISLab. He has substantial lab experience and undergraduate degrees in Biochemistry and Molecular Biology with a Masters in Biomedical Science and Biotechnology as part of merging his loves of technology and science over the last decade. Corey hopes to leverage experience in data QA/QC, visualization, and analysis to help create robust datasets and pipelines for applying Artificial Intelligence to improving healthcare outcomes. +I have an educational background is in Biochemistry & Molecular Genetics and having been working as a software developer in science for about 10 years. ### Education @@ -17,4 +17,4 @@ Corey Cox is a biochemist, developer, and data scientist and is currently a Scie ### Department -[Department of Biomedical Informatics](https://medschool.cuanschutz.edu/dbmi) \ No newline at end of file +[University of North Carolina, Chapel Hill Department of Genetics](https://www.med.unc.edu/genetics) diff --git a/_members/eric-hurwitz.md b/_members/eric-hurwitz.md index 6e7a978..cccec4d 100644 --- a/_members/eric-hurwitz.md +++ b/_members/eric-hurwitz.md @@ -8,15 +8,13 @@ links: linkedin: eric-hurwitz-76654b184 --- -Eric Hurwitz is a Postdoctoral Fellow. -His research leverages a variety of large-scale biomedical data to enrich personal health. -The predominant area of his work focuses on digital health and wearable technology coupled with machine learning for early disease detection and enhanced patient monitoring. -He is also actively involved in research with the National COVID Cohort Collaborative (N3C) studying the interplay between COVID-19 and HIV. +I have an educational background is in Biochemistry & Molecular Genetics and having been working as a software developer in science for about 10 years. ### Education + - BS, Biochemistry, University of Mary Washington, 2018 - PhD, Clinical and Translational Science (Cancer and Molecular Medicine concentration), Virginia Commonwealth University, 2023 ### Department -[Department of Biomedical Informatics](https://medschool.cuanschutz.edu/dbmi) +[University of North Carolina, Chapel Hill Department of Genetics](https://www.med.unc.edu/genetics) diff --git a/_members/evan-connelly.md b/_members/evan-connelly.md index 735af46..f717ef0 100644 --- a/_members/evan-connelly.md +++ b/_members/evan-connelly.md @@ -14,6 +14,6 @@ Evan is currently a student at MSOE studying Chemical and Biomolecular Engineeri - B.S. Chemical and Biomolecular Engineering, Milwaukee School of Engineering, 2024 -### Departments +### Department -[Department of Biomedical Informatics](https://medschool.cuanschutz.edu/dbmi) \ No newline at end of file +[University of North Carolina, Chapel Hill Department of Genetics](https://www.med.unc.edu/genetics) diff --git a/_members/glass-elsarboukh.md b/_members/glass-elsarboukh.md index 704acff..0b7c264 100644 --- a/_members/glass-elsarboukh.md +++ b/_members/glass-elsarboukh.md @@ -8,7 +8,7 @@ links: linkedin: glass-ships --- -Glass is a Scientific Software Engineer with TISLab at University of Colorado's Center for Health AI. They have a background in Physics and maintaining Dark Matter analysis software, with a special interest in enabling science and research through effective computational infrastructures. In their freetime, Glass enjoys self-producing music and playing with their cat. +Research Software Engineer with a background in physics, a love for cats and passion for film and music (fellow metalheads, reach out!) ### Education @@ -16,4 +16,4 @@ Glass is a Scientific Software Engineer with TISLab at University of Colorado's ### Department -[Department of Biomedical Informatics](https://medschool.cuanschutz.edu/dbmi) \ No newline at end of file +[University of North Carolina, Chapel Hill Department of Genetics](https://www.med.unc.edu/genetics) diff --git a/_members/julie-mcmurry.md b/_members/julie-mcmurry.md index 1361245..5409d42 100644 --- a/_members/julie-mcmurry.md +++ b/_members/julie-mcmurry.md @@ -23,4 +23,4 @@ She is cross-trained in biomedical research, public health, project management, ### Department -[Department of Biomedical Informatics](https://medschool.cuanschutz.edu/dbmi) +[University of North Carolina, Chapel Hill Department of Genetics](https://www.med.unc.edu/genetics) diff --git a/_members/kevin-schaper.md b/_members/kevin-schaper.md index 429da8d..7a1f21b 100644 --- a/_members/kevin-schaper.md +++ b/_members/kevin-schaper.md @@ -15,4 +15,4 @@ He has a BS in Computer Science from University of Oregon and significant experi ### Department -[Department of Biomedical Informatics](https://medschool.cuanschutz.edu/dbmi) \ No newline at end of file +[University of North Carolina, Chapel Hill Department of Genetics](https://www.med.unc.edu/genetics) diff --git a/_members/matthew-brush.md b/_members/matthew-brush.md index c0a8c57..13dc158 100644 --- a/_members/matthew-brush.md +++ b/_members/matthew-brush.md @@ -17,4 +17,4 @@ Matt performs ontology development, data modeling, and curation for Monarch Init ### Department -[Department of Biomedical Informatics](https://medschool.cuanschutz.edu/dbmi) +[University of North Carolina, Chapel Hill Department of Genetics](https://www.med.unc.edu/genetics) diff --git a/_members/melissa-haendel.md b/_members/melissa-haendel.md index ab17f9e..62d6b2a 100644 --- a/_members/melissa-haendel.md +++ b/_members/melissa-haendel.md @@ -18,8 +18,7 @@ links: ### Bio -Melissa's vision is to fundamentally alter the fabric of biomedical science, utilizing her art as a data translator to weave together healthcare systems, basic science research, and patients; through development of data integration technologies, innovative communication strategies, and collaborative education and outreach. -Her demonstrated success in leadership of cross-disciplinary international teams, development of applications used for rare disease diagnostics, implementation of platforms and tools for translational research, and open and reproducible science will serve her and the community at large to effect real change. +I was trained initially in molecular genetics and developmental biology, and later in semantic engineering. I am passionate about advancing public health technologies and rare disease diagnostics and care through data integration strategies. I love gardening, cooking, and traveling (to eat many cuisines!). ### Education @@ -28,4 +27,4 @@ Her demonstrated success in leadership of cross-disciplinary international teams ### Department -[Department of Biomedical Informatics](https://medschool.cuanschutz.edu/dbmi) \ No newline at end of file +[University of North Carolina, Chapel Hill Department of Genetics](https://www.med.unc.edu/genetics) diff --git a/_members/sabrina-toro.md b/_members/sabrina-toro.md index 5091484..7558aeb 100644 --- a/_members/sabrina-toro.md +++ b/_members/sabrina-toro.md @@ -24,4 +24,4 @@ She has significant experience working with model organism data, and she has mad ### Department -[Department of Biomedical Informatics](https://medschool.cuanschutz.edu/dbmi) \ No newline at end of file +[University of North Carolina, Chapel Hill Department of Genetics](https://www.med.unc.edu/genetics) diff --git a/_members/sarah-gehrke.md b/_members/sarah-gehrke.md index a2b0acd..edb403b 100644 --- a/_members/sarah-gehrke.md +++ b/_members/sarah-gehrke.md @@ -15,4 +15,4 @@ B.S. Chemistry, University of Colorado, Colorado Springs, CO, 2012 ### Department -[Department of Biomedical Informatics](https://medschool.cuanschutz.edu/dbmi) \ No newline at end of file +[University of North Carolina, Chapel Hill Department of Genetics](https://www.med.unc.edu/genetics) diff --git a/_members/shahim-essaid.md b/_members/shahim-essaid.md index dd342fa..eb8eb66 100644 --- a/_members/shahim-essaid.md +++ b/_members/shahim-essaid.md @@ -17,4 +17,4 @@ He has an MD University of Baghdad, Iraq and holds a graduate certificate Depart ### Department -[Department of Biomedical Informatics](https://medschool.cuanschutz.edu/dbmi) +[University of North Carolina, Chapel Hill Department of Genetics](https://www.med.unc.edu/genetics) diff --git a/_members/shawn-oneil.md b/_members/shawn-oneil.md index ab49621..0329e8f 100644 --- a/_members/shawn-oneil.md +++ b/_members/shawn-oneil.md @@ -20,4 +20,4 @@ Shawn is the author of [A Primer for Computational Biology](https://open.oregons ### Department -[Department of Biomedical Informatics](https://medschool.cuanschutz.edu/dbmi) +[University of North Carolina, Chapel Hill Department of Genetics](https://www.med.unc.edu/genetics) diff --git a/_members/tursynay-issabekova.md b/_members/tursynay-issabekova.md index a7659da..cdc3c5b 100644 --- a/_members/tursynay-issabekova.md +++ b/_members/tursynay-issabekova.md @@ -16,4 +16,4 @@ She joins us from OSU's Office of the Registrar, where she gained strong analyti ### Department -[Department of Biomedical Informatics](https://medschool.cuanschutz.edu/dbmi) \ No newline at end of file +[University of North Carolina, Chapel Hill Department of Genetics](https://www.med.unc.edu/genetics) From 018987ecf0f72045b37349411e5adad60ff55b2c Mon Sep 17 00:00:00 2001 From: Chris Roeder <47036053+chrisroederucdenver@users.noreply.github.com> Date: Fri, 10 May 2024 14:05:03 -0600 Subject: [PATCH 2/2] fix Eric's bio --- _members/eric-hurwitz.md | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/_members/eric-hurwitz.md b/_members/eric-hurwitz.md index cccec4d..d9bad36 100644 --- a/_members/eric-hurwitz.md +++ b/_members/eric-hurwitz.md @@ -8,7 +8,9 @@ links: linkedin: eric-hurwitz-76654b184 --- -I have an educational background is in Biochemistry & Molecular Genetics and having been working as a software developer in science for about 10 years. +I am a postdoctoral fellow interested in leveraging digital and mobile health technologies with machine learning and personalized digital phenotyping for early disease detection. + + ### Education