From bc42e104bbdf4eff6b822dcd08409718429e9152 Mon Sep 17 00:00:00 2001 From: "Scott C. Livingston" Date: Tue, 1 Oct 2024 11:35:10 -0700 Subject: [PATCH 01/10] Git-ignore Emacs backup files --- .gitignore | 1 + 1 file changed, 1 insertion(+) diff --git a/.gitignore b/.gitignore index 2a7b09b..eaad3e5 100644 --- a/.gitignore +++ b/.gitignore @@ -12,6 +12,7 @@ __pycache__/ *.ipynb_checkpoints *.log *.DS_Store +*~ *.json *.txt From ca22e2cf7263c8550412994cb44ca79ea40e5601 Mon Sep 17 00:00:00 2001 From: "Scott C. Livingston" Date: Tue, 1 Oct 2024 11:36:47 -0700 Subject: [PATCH 02/10] TEST: consolidate pytest configuration Best practice is to have configuration specified in one location because it is easier to find and modify values. --- pyproject.toml | 5 ----- pytest.ini | 1 + 2 files changed, 1 insertion(+), 5 deletions(-) diff --git a/pyproject.toml b/pyproject.toml index 942e517..3b3073c 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -37,8 +37,3 @@ readme = "README.md" [project.scripts] from_json = "flowsynth.main:main" - -[tool.pytest.ini_options] -pythonpath = [ - "src" -] diff --git a/pytest.ini b/pytest.ini index 43a3497..edf864f 100644 --- a/pytest.ini +++ b/pytest.ini @@ -1,2 +1,3 @@ [pytest] testpaths="./tests/" +pythonpath = src From 874650651201b9dd12a90959d26439e718ce21b9 Mon Sep 17 00:00:00 2001 From: "Scott C. Livingston" Date: Tue, 1 Oct 2024 11:56:47 -0700 Subject: [PATCH 03/10] TEST: correct package import pytest is configured to search under src/ directory, and furthermore, flowsynth is the package we want, not "src". --- tests/test_1.py | 8 ++++---- tests/test_reactive_1.py | 8 ++++---- 2 files changed, 8 insertions(+), 8 deletions(-) diff --git a/tests/test_1.py b/tests/test_1.py index 87eeec2..a82a438 100644 --- a/tests/test_1.py +++ b/tests/test_1.py @@ -3,10 +3,10 @@ import sys sys.path.append('../') -from src.flowsynth.components.automata import get_system_automaton, get_tester_automaton, get_product_automaton -from src.flowsynth.components.transition_system import TransitionSystemInput, TranSys -from src.flowsynth.components.product import sync_prod -from src.flowsynth.optimization.optimize import solve +from flowsynth.components.automata import get_system_automaton, get_tester_automaton, get_product_automaton +from flowsynth.components.transition_system import TransitionSystemInput, TranSys +from flowsynth.components.product import sync_prod +from flowsynth.optimization.optimize import solve def test_sample(): states_list = [0,1,2,3,4,5] diff --git a/tests/test_reactive_1.py b/tests/test_reactive_1.py index bce1aea..1be1f68 100644 --- a/tests/test_reactive_1.py +++ b/tests/test_reactive_1.py @@ -3,10 +3,10 @@ import sys sys.path.append('../') -from src.flowsynth.components.automata import get_system_automaton, get_tester_automaton, get_product_automaton -from src.flowsynth.components.transition_system import TransitionSystemInput, TranSys -from src.flowsynth.components.product import sync_prod -from src.flowsynth.optimization.optimize import solve +from flowsynth.components.automata import get_system_automaton, get_tester_automaton, get_product_automaton +from flowsynth.components.transition_system import TransitionSystemInput, TranSys +from flowsynth.components.product import sync_prod +from flowsynth.optimization.optimize import solve def test_reactive(): states_list = ['init', 'd1', 'd2', 'int_goal', 'p1', 'p2', 'goal'] From 18cb44f0b318d2846323b120d62bf7087a6afb72 Mon Sep 17 00:00:00 2001 From: "Scott C. Livingston" Date: Tue, 1 Oct 2024 12:35:49 -0700 Subject: [PATCH 04/10] check return values in subprocesses --- get_spot.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/get_spot.py b/get_spot.py index 07ea114..b8dc3bc 100644 --- a/get_spot.py +++ b/get_spot.py @@ -59,8 +59,8 @@ def make_spot(): print('running: '+str(cmd)+' in '+path) # subprocess.call(cmd, cwd=path) subprocess.check_call('./configure --prefix /flowsynth/.venv', shell=True, cwd=path) - subprocess.call(['make'], cwd=path) - subprocess.call(['make','install'], cwd=path) + subprocess.check_call(['make'], cwd=path) + subprocess.check_call(['make','install'], cwd=path) if __name__ == '__main__': fetch_spot() From e01c71e2133121233dc5b50b82dfbab12fcefe54 Mon Sep 17 00:00:00 2001 From: "Scott C. Livingston" Date: Tue, 1 Oct 2024 12:37:43 -0700 Subject: [PATCH 05/10] use sys.prefix for Spot configure --- get_spot.py | 7 +++---- 1 file changed, 3 insertions(+), 4 deletions(-) diff --git a/get_spot.py b/get_spot.py index b8dc3bc..2536f56 100644 --- a/get_spot.py +++ b/get_spot.py @@ -55,10 +55,9 @@ def untar(filename): def make_spot(): """Compile spot.""" path = SPOT_PATH - cmd = ["./configure --prefix "+ ENV_PATH] - print('running: '+str(cmd)+' in '+path) - # subprocess.call(cmd, cwd=path) - subprocess.check_call('./configure --prefix /flowsynth/.venv', shell=True, cwd=path) + cmd = f'./configure --prefix {ENV_PATH}' + print(f'running: `{cmd}` in {path}') + subprocess.check_call(cmd, shell=True, cwd=path) subprocess.check_call(['make'], cwd=path) subprocess.check_call(['make','install'], cwd=path) From a979b70f1266313e3402264e4ed2b2ac015bbad1 Mon Sep 17 00:00:00 2001 From: "Scott C. Livingston" Date: Tue, 1 Oct 2024 12:51:23 -0700 Subject: [PATCH 06/10] get_spot.py: verify file integrity via SHA256 --- get_spot.py | 9 +++++++++ 1 file changed, 9 insertions(+) diff --git a/get_spot.py b/get_spot.py index 2536f56..0b7ec86 100644 --- a/get_spot.py +++ b/get_spot.py @@ -1,4 +1,5 @@ """Download and install spot. (Code adapted from tulip-control/dd/download.py)""" +import hashlib import tarfile import urllib.error import urllib.request @@ -9,6 +10,7 @@ import sys SPOT_VERSION: _ty.Final = '2.12' +SPOT_SHA256: _ty.Final = '26ba076ad57ec73d2fae5482d53e16da95c47822707647e784d8c7cec0d10455' SPOT_TARBALL: _ty.Final = f'spot-{SPOT_VERSION}.tar.gz' SPOT_URL: _ty.Final = ('http://www.lrde.epita.fr/dload/spot/' f'spot-{SPOT_VERSION}.tar.gz') @@ -16,6 +18,9 @@ SPOT_PATH = os.path.join(FILE_PATH,f'spot-{SPOT_VERSION}') ENV_PATH = sys.prefix +def is_hash_correct(filename): + return SPOT_SHA256 == hashlib.sha256(open(filename, 'rb').read()).hexdigest() + def fetch_spot(): filename = SPOT_TARBALL fetch(SPOT_URL, filename) @@ -24,6 +29,8 @@ def fetch_spot(): def fetch(url,filename): if os.path.isfile(filename): + if not is_hash_correct(filename): + raise RuntimeError(f'File `{filename}` already present but has unexpected hash.') print( f'File `{filename}` already present.') return @@ -45,6 +52,8 @@ def fetch(url,filename): f'{response.url}\n' 'Wrote the downloaded data to file: ' f'`{filename}`\n') + if not is_hash_correct(filename): + raise RuntimeError(f'Downloaded file `{filename}` has unexpected hash.') def untar(filename): print(f'++ unpack: {filename}') From fd7363237f1d5c5b01c5faa1d752aabfc080709c Mon Sep 17 00:00:00 2001 From: "Scott C. Livingston" Date: Tue, 1 Oct 2024 12:58:52 -0700 Subject: [PATCH 07/10] CI: new main workflow --- .github/workflows/main.yaml | 35 +++++++++++++++++++++++++++++++++++ 1 file changed, 35 insertions(+) create mode 100644 .github/workflows/main.yaml diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml new file mode 100644 index 0000000..bd2829d --- /dev/null +++ b/.github/workflows/main.yaml @@ -0,0 +1,35 @@ +--- +# configuration for GitHub Actions +name: flowsynth tests +on: + push: + pull_request: + +jobs: + build: + name: Build and test + runs-on: ubuntu-22.04 + strategy: + matrix: + python-version: [ + '3.10', + ] + steps: + - uses: actions/checkout@v4 + - uses: pdm-project/setup-pdm@v4 + with: + python-version: ${{ matrix.python-version }} + cache: true + - name: Setup testing environment + run: | + sudo apt update + sudo apt install -y libgraphviz-dev + - name: Install Python dependencies + run: | + pdm install + - name: Build and install Spot + run: | + pdm run python get_spot.py + - name: Build and install Spot + run: | + pdm run pytest -v tests From b87579ae0204b86ef48e41068f5a9e609423ab2e Mon Sep 17 00:00:00 2001 From: "Scott C. 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Livingston" Date: Tue, 1 Oct 2024 13:10:08 -0700 Subject: [PATCH 09/10] CI: fix misprint --- .github/workflows/main.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml index bd2829d..ff26615 100644 --- a/.github/workflows/main.yaml +++ b/.github/workflows/main.yaml @@ -30,6 +30,6 @@ jobs: - name: Build and install Spot run: | pdm run python get_spot.py - - name: Build and install Spot + - name: Run tests run: | pdm run pytest -v tests From af80d55e36aecba2c5b2d651285cd7dd57a3b20f Mon Sep 17 00:00:00 2001 From: "Scott C. Livingston" Date: Tue, 1 Oct 2024 13:22:24 -0700 Subject: [PATCH 10/10] CI: install graphviz --- .github/workflows/main.yaml | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml index ff26615..3510eda 100644 --- a/.github/workflows/main.yaml +++ b/.github/workflows/main.yaml @@ -23,7 +23,9 @@ jobs: - name: Setup testing environment run: | sudo apt update - sudo apt install -y libgraphviz-dev + sudo apt install -y \ + libgraphviz-dev \ + graphviz - name: Install Python dependencies run: | pdm install