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Releases: ur-whitelab/exmol

v2.0.0

31 May 04:03
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  • Added surrogate model explanation method
  • Added support for attributing ECFP, MACCS fingerprints, rdkit descriptors and plotting them
  • Example notebooks for new method
  • Fixed chirality stripping in sanitize
  • Made it possible to use multiple base molecules for ECFP descriptors

v2.0.0.dev2

18 May 18:32
9474412
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v2.0.0.dev2 Pre-release
Pre-release

Pre-release 2

  • Added surrogate model explanation method
  • Added support for attributing ECFP, MACCS fingerprints, rdkit descriptors and plotting them
  • Example notebooks for new method
  • Fixed chirality stripping in sanitize
  • Made it possible to use multiple base molecules for ECFP descriptors

v2.0.0-dev1

06 May 15:38
1661e50
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v2.0.0-dev1 Pre-release
Pre-release

Pre-release

  • Added surrogate model explanation method
  • Added support for attributing ECFP, MACCS fingerprints, rdkit descriptors and plotting them
  • Example notebooks for new method

v1.1.0

03 May 14:39
765c7f1
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Removed need for model(s) functions to take both SMILES and SELFIES.

v1.0.2

03 May 14:32
e01f557
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  • Switched to bulk Tanimoto to improve speed
  • Tightened chemed api limit

v1.0.1

04 Apr 13:34
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  • Added new quiet mode to disable progress bars

v1.0.0

21 Jan 20:55
05f204c
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Possibly Breaking changes

  • Switched to SELFIES v2.0, so custom alphabets will need to be ported.

Changes

  • Removed "experimental" tag from Chemed and Custom methods

Bug fixes

  • Type annotations now pass mypy
  • Paper models now generate SVGs correctly and fixed token issues

v0.6.0

17 Jan 23:05
4e280ab
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  • Changed behavior of num_samples so that it is not affected by mutation count in STONED

v0.5.2

04 Jan 18:23
8a96722
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  • Fixed SMILES escaping in URL in chemed

v0.5.1

23 Nov 14:27
fe373d9
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  • Fixed similarity float vs int in chemed