You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
Hi, I am getting this error when I run cliqueSNV with some samples. Could you let me know what this means?
Compute SNV data structurejava.util.concurrent.ExecutionException: java.lang.ArrayIndexOutOfBoundsException: Index -1 out of bounds for length 352320
at java.base/java.util.concurrent.FutureTask.report(FutureTask.java:122)
at java.base/java.util.concurrent.FutureTask.get(FutureTask.java:205)
at edu.gsu.start.Start.pacBioSNV(Start.java:211)
at edu.gsu.start.Start.main(Start.java:69)
Caused by: java.lang.ArrayIndexOutOfBoundsException: Index -1 out of bounds for length 352320
at edu.gsu.util.builders.SNVStructureBuilder.fillRowsAndCols(SNVStructureBuilder.java:91)
at edu.gsu.util.builders.SNVStructureBuilder.buildPacBio(SNVStructureBuilder.java:41)
at edu.gsu.algorithm.SNVPacBioMethod.getHaplotypes(SNVPacBioMethod.java:102)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
at java.base/java.lang.Thread.run(Thread.java:829)
SNV got 1 haplotypes
The text was updated successfully, but these errors were encountered:
Hi, I am getting this error when I run cliqueSNV with some samples. Could you let me know what this means?
The text was updated successfully, but these errors were encountered: