fix misc bugs #209
Workflow file for this run
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| # Workflow for building the ACED ETL image and pushing it to the quay.io repository | |
| # | |
| # Optionally debug via SSH | |
| # Ref: https://fleetdm.com/engineering/tips-for-github-actions-usability | |
| # | |
| # To use this step uncomment and place anywhere in the build steps. The build will pause on this step and | |
| # output a ssh address associated with the Github action worker. Helpful for debugging build steps and | |
| # and intermediary files/artifacts. | |
| # | |
| # - name: Setup tmate session | |
| # uses: mxschmitt/action-tmate@v3 | |
| name: Build and publish ACED ETL image | |
| on: | |
| push: | |
| workflow_dispatch: | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Check out code | |
| uses: actions/checkout@v2 | |
| - name: Login to Quay.io | |
| uses: docker/login-action@v2 | |
| with: | |
| registry: quay.io | |
| username: ${{ secrets.QUAY_USERNAME }} | |
| password: ${{ secrets.QUAY_ROBOT_TOKEN }} | |
| - name: Build and push image | |
| run: | | |
| # Set Image tag to the branch name | |
| BRANCH=$(echo ${GITHUB_REF#refs/*/} | tr / _) | |
| REPO=quay.io/ohsu-comp-bio/aced-etl | |
| echo "Setting image tag to $REPO:$BRANCH" | |
| # Login to Quay.io and build image | |
| docker login quay.io | |
| docker build -t $REPO:$BRANCH ./etl-job | |
| # Add 'latest' tag to 'main' image | |
| if [[ $BRANCH == 'main' ]]; then | |
| docker image tag $REPO:main $REPO:latest | |
| fi | |
| # Push the tagged image to Quay.io | |
| docker push --all-tags $REPO |