couple more fs changes

AlexsLemonade · Aug 6, 2024 · 8cdd742 · 8cdd742
1 parent e14cdaa
commit 8cdd742
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Showing 2 changed files with 2 additions and 6 deletions.
diff --git a/RNA-seq/00c-tximeta_other_species.Rmd b/RNA-seq/00c-tximeta_other_species.Rmd
@@ -157,9 +157,7 @@ quant_dir <- file.path(data_dir, "salmon_quant")
 
 # Create a directory to hold the tximport results if it doesn't exist yet
 txi_dir <- file.path(data_dir, "txi")
-if (!dir.exists(txi_dir)) {
-  dir.create(txi_dir, recursive = TRUE)
-}
+fs::dir_create(txi_dir)
 ```
 
 ```{r input-names}

diff --git a/RNA-seq/06-openpbta_heatmap.Rmd b/RNA-seq/06-openpbta_heatmap.Rmd
@@ -56,9 +56,7 @@ data_dir <- file.path("data", "open-pbta")
 
 # We'll store the heatmap in plots/open-pbta - create directory if it doesn't exist yet
 plots_dir <- file.path("plots", "open-pbta")
-if (!dir.exists(plots_dir)) {
-  dir.create(plots_dir, recursive = TRUE)
-}
+fs::dir_create(plots_dir)
 ```
 
 #### Input files