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one more wording tweak, and update PDFs
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sjspielman committed Dec 2, 2024
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2 changes: 1 addition & 1 deletion module-cheatsheets/scRNA-seq-advanced-cheatsheet.md
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Expand Up @@ -239,7 +239,7 @@ Read the [`bluster` package documentation](https://rdrr.io/bioc/bluster/) and vi
|----------------------|--------------------|---------------------|---------------|
| `bluster`| [`clusterRows()`](https://rdrr.io/bioc/bluster/man/clusterRows.html)| Cluster rows of a matrix | Perform clustering using a variety of algorithms on a matrix-like object |
| `bluster`| [`KmeansParam()`](https://rdrr.io/bioc/bluster/man/KmeansParam-class.html)| K-means clustering parameters | Set up parameters to run clustering using `kmeans()` within `bluster::clusterRows()` |
| `bluster`| [`NNGraphParam()`](https://rdrr.io/bioc/bluster/man/NNGraphParam-class.html)| Graph-based clustering parameters | Set up parameters for nearest-neighbor (NN) graph-based clustering algorithms to be applied within `bluster::clusterRows()` |
| `bluster`| [`NNGraphParam()`](https://rdrr.io/bioc/bluster/man/NNGraphParam-class.html)| Graph-based clustering parameters | Set up parameters for nearest-neighbor (NN) graph-based clustering algorithms within `bluster::clusterRows()` |
| `bluster`| [`approxSilhouette()`](https://rdrr.io/bioc/bluster/man/approxSilhouette.html)| Approximate silhouette width | Calculate an approximate silhouette width for each cell given a set of clusters |
| `bluster`| [`neighborPurity()`](https://rdrr.io/bioc/bluster/man/neighborPurity.html)| Compute neighborhood purity | Calculate neighborhood purity for each cell given a set of clusters |
| `bluster`| [`bootstrapStability()`](https://rdrr.io/bioc/bluster/man/bootstrapStability.html)| Assess cluster stability by bootstrapping | Generate cluster bootstrap replicates to estimate cluster robustness to sampling noise |
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2 changes: 1 addition & 1 deletion module-cheatsheets/scRNA-seq-cheatsheet.md
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Expand Up @@ -165,7 +165,7 @@ Read the [`bluster` package documentation](https://rdrr.io/bioc/bluster/) and [t
|----------------------|--------------------|---------------------|---------------|
| `bluster`| [`clusterRows()`](https://rdrr.io/bioc/bluster/man/clusterRows.html)| Cluster rows of a matrix | Perform clustering using a variety of algorithms on a matrix-like object |
| `bluster`| [`KmeansParam()`](https://rdrr.io/bioc/bluster/man/KmeansParam-class.html)| K-means clustering parameters | Set up parameters to run clustering using `kmeans()` within `bluster::clusterRows()` |
| `bluster`| [`NNGraphParam()`](https://rdrr.io/bioc/bluster/man/NNGraphParam-class.html)| Graph-based clustering parameters | Set up parameters for nearest-neighbor (NN) graph-based clustering algorithms to be applied within `bluster::clusterRows()` |
| `bluster`| [`NNGraphParam()`](https://rdrr.io/bioc/bluster/man/NNGraphParam-class.html)| Graph-based clustering parameters | Set up parameters for nearest-neighbor (NN) graph-based clustering algorithms within `bluster::clusterRows()` |



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