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Update pathway analysis and RNA-seq cheatsheets #792

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merged 9 commits into from
Aug 8, 2024
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Clarification re: gsvaParam()
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jaclyn-taroni committed Aug 7, 2024
commit 750e99aea8765508ff6e7ee1c14433b27ed46e0b
2 changes: 1 addition & 1 deletion module-cheatsheets/pathway-analysis-cheatsheet.md
Original file line number Diff line number Diff line change
@@ -95,7 +95,7 @@ Read the [`GSVA` package documentation](https://www.bioconductor.org/packages/re
| Library/Package | Piece of Code | What it's called | What it does |
|-------------------------------|--------------------------------------------------------------|--------------------------------|--------------------------------------------------------------------------|
| `GSVA` | [`gsva()`](https://rdrr.io/github/rcastelo/GSVA/man/gsva.html) | Gene Set Variation Analysis (GSVA) | Estimates gene set variation analysis enrichment scores on given gene expression matrix |
| `GSVA` | [`gsvaParam()`](https://rdrr.io/github/rcastelo/GSVA/man/gsvaParam-class.html) | Gene Set Variation Analysis (GSVA) | Specify parameters to use with `gsva()` |
| `GSVA` | [`gsvaParam()`](https://rdrr.io/github/rcastelo/GSVA/man/gsvaParam-class.html) | Gene Set Variation Analysis (GSVA) Parameters | Specify parameters to use with `gsva()` |


### `qusage`