GHA: Automated live (rendered) versions of the notebooks #821
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alexslemonade-docs-bot
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sjspielman
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Dec 4, 2024
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| # ensure barcodes are set as column names in the SCE object | ||
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@jashapiro would you prefer this comment not be there (and I move it to the end of the line so it goes away) for when you teach this? I'm going to fix those spots I introduced in the integration notebook; let me know if you want me to fix this one too.
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yeah, probably better to have it at the end of the line
sjspielman
reviewed
Dec 4, 2024
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| Once we have the rankings, we can calculate the AUC scores for both gene sets in all cells with the `AUCell_calcAUC()` function. | ||
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| ```{r calc_auc, live=TRUE} |
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Flagged items fixed in #823 |
For the record, I don't think you had to close this PR; rerunning the action should have just updated the branch. |
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I wasn't sure...so I figured this was safest. But noted 👍 |
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Description:
This PR auto-generated from github actions running make-live.R with:
Instruction for reviewers:
Make sure that all the notebooks have been made into
_liveversions appropriately and have the updates you expect.