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@AllenInstitute

Allen Institute

Please visit http://alleninstitute.github.io/ for more information.

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  1. AllenSDK AllenSDK Public

    code for reading and processing Allen Institute for Brain Science data

    Jupyter Notebook 351 151

  2. dipde dipde Public

    Numerical solver for coupled population density equations

    Python 23 14

Repositories

Showing 10 of 409 repositories
  • MIES Public

    Multichannel Igor Electrophysiology Suite

    AllenInstitute/MIES’s past year of commit activity
    IGOR Pro 25 9 294 6 Updated Jan 24, 2025
  • cplAE_MET Public

    Coupled autoencoder extension for MET analysis.

    AllenInstitute/cplAE_MET’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Jan 24, 2025
  • spatial_compare Public

    package for comparing spatial transcriptomics datasets

    AllenInstitute/spatial_compare’s past year of commit activity
    Jupyter Notebook 5 9 10 6 Updated Jan 24, 2025
  • cell_type_mapper Public

    Repository for storing prototype functionality implementations for the BKP

    AllenInstitute/cell_type_mapper’s past year of commit activity
    Python 21 4 5 2 Updated Jan 24, 2025
  • deep-neurographs Public

    A Python package that utilizes machine learning to correct split mistakes in a fragmented neuron segmentation.

    AllenInstitute/deep-neurographs’s past year of commit activity
    Jupyter Notebook 3 MIT 0 0 0 Updated Jan 24, 2025
  • mtrain_regimens Public

    Repository to track training stages and regimens for visual behavior

    AllenInstitute/mtrain_regimens’s past year of commit activity
    Python 3 4 14 0 Updated Jan 24, 2025
  • openscope_mousemotion Public Forked from YayaWeizz/RDK

    Moving dot stimuli for the OpenScope MouseMotion project

    AllenInstitute/openscope_mousemotion’s past year of commit activity
    Python 0 GPL-3.0 1 0 0 Updated Jan 24, 2025
  • scrattch.taxonomy Public

    Allen Institute Taxonomy building R package

    AllenInstitute/scrattch.taxonomy’s past year of commit activity
    HTML 1 1 10 0 Updated Jan 23, 2025
  • scrattch.patchseq Public
    AllenInstitute/scrattch.patchseq’s past year of commit activity
    R 0 1 0 1 Updated Jan 24, 2025
  • npc_sessions Public

    Tools for accessing and packaging data from behavior and epyhys sessions from the Mindscope Neuropixels team, in the cloud.

    AllenInstitute/npc_sessions’s past year of commit activity
    Python 1 1 53 (3 issues need help) 0 Updated Jan 23, 2025
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