Fixed section types (as in MorphIO)

BlueBrain · Oct 29, 2024 · 2bb410f · 2bb410f
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commit 2bb410f
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Showing 2 changed files with 4 additions and 4 deletions.
diff --git a/tests/unit/test_conn_rewiring.py b/tests/unit/test_conn_rewiring.py
@@ -23,8 +23,8 @@
 from connectome_manipulator import log
 
 
-# SONATA section type mapping: 0 = soma, 1 = axon, 2 = basal, 3 = apical
-SEC_TYPE_MAP = {nm.AXON: 1, nm.BASAL_DENDRITE: 2, nm.APICAL_DENDRITE: 3}
+# SONATA section type mapping (as in MorphIO): 1 = soma, 2 = axon, 3 = basal, 4 = apical
+SEC_TYPE_MAP = {nm.AXON: 2, nm.BASAL_DENDRITE: 3, nm.APICAL_DENDRITE: 4}
 
 
 @pytest.fixture

diff --git a/tests/unit/test_conn_wiring.py b/tests/unit/test_conn_wiring.py
@@ -20,8 +20,8 @@
 from connectome_manipulator.connectome_manipulation.converters import EdgeWriter
 
 
-# SONATA section type mapping: 0 = soma, 1 = axon, 2 = basal, 3 = apical
-SEC_TYPE_MAP = {nm.AXON: 1, nm.BASAL_DENDRITE: 2, nm.APICAL_DENDRITE: 3}
+# SONATA section type mapping (as in MorphIO): 1 = soma, 2 = axon, 3 = basal, 4 = apical
+SEC_TYPE_MAP = {nm.AXON: 2, nm.BASAL_DENDRITE: 3, nm.APICAL_DENDRITE: 4}
 
 
 @pytest.fixture