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New features related to the revision of the accompanying manuscript #6

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merged 34 commits into from
Nov 5, 2024

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chr-pok
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@chr-pok chr-pok commented Oct 29, 2024

  • Added new features and examples (cross-validation, synapse parameter correlation)
  • Changed afferent section types in accordance with MorphIO (1: soma, 2: axon, 3: basal dendrite, 4: apical dendrite)
  • Improved readme and documentation

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Codecov Report

Attention: Patch coverage is 29.05983% with 83 lines in your changes missing coverage. Please review.

Project coverage is 73.67%. Comparing base (7db6de1) to head (3c66aa1).
Report is 2 commits behind head on main.

Files with missing lines Patch % Lines
...nnectome_manipulator/model_building/model_types.py 17.24% 72 Missing ⚠️
connectome_manipulator/access_functions.py 14.28% 6 Missing ⚠️
connectome_manipulator/cli.py 0.00% 3 Missing ⚠️
...nectome_manipulation/manipulation/conn_rewiring.py 71.42% 2 Missing ⚠️
Additional details and impacted files
@@            Coverage Diff             @@
##             main       #6      +/-   ##
==========================================
- Coverage   74.96%   73.67%   -1.30%     
==========================================
  Files          35       35              
  Lines        4131     4240     +109     
==========================================
+ Hits         3097     3124      +27     
- Misses       1034     1116      +82     
Flag Coverage Δ
pytest 73.67% <29.05%> (-1.30%) ⬇️

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@chr-pok chr-pok marked this pull request as ready for review October 29, 2024 15:16
@chr-pok chr-pok requested a review from matz-e October 29, 2024 15:18
@chr-pok chr-pok merged commit 32c0e55 into main Nov 5, 2024
8 checks passed
@chr-pok chr-pok deleted the NETNEURO-24-0092-Rev1 branch November 5, 2024 07:34
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3 participants