fix: set PYTHONPATH in docker (#120)

CCBR · Oct 16, 2024 · 1fc7dc0 · 1fc7dc0
1 parent 180ba71
commit 1fc7dc0
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diff --git a/docker/star_ucsc_cufflinks/Dockerfile b/docker/star_ucsc_cufflinks/Dockerfile
@@ -14,6 +14,7 @@ ENV CONDA_ENV=py3.6
 RUN mamba env create -n ${CONDA_ENV} -f /data2/environment.yml && \
     echo "conda activate ${CONDA_ENV}" > ~/.bashrc
 ENV PATH="/opt2/conda/envs/${CONDA_ENV}/bin:$PATH"
+ENV PYTHONPATH="/opt2/conda/envs/py3.6/lib/python3.6/site-packages/"
 ENV R_LIBS_USER=/opt2/conda/lib/R/library/
 
 # install find_circ

diff --git a/docker/star_ucsc_cufflinks/meta.yml b/docker/star_ucsc_cufflinks/meta.yml
@@ -1,4 +1,4 @@
 dockerhub_namespace: nciccbr
 image_name: charlie_star_ucsc_cufflinks
-version: v0.4.0
+version: v0.4.1
 container: "$(dockerhub_namespace)/$(image_name):$(version)"