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Extract Template Code - Clean Raw Counts #73

Closed
6 tasks done
sync-by-unito bot opened this issue Nov 12, 2024 · 1 comment · Fixed by #79
Closed
6 tasks done

Extract Template Code - Clean Raw Counts #73

sync-by-unito bot opened this issue Nov 12, 2024 · 1 comment · Fixed by #79
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@kelly-sovacool
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MOSuite RepoName NIDAP sync with the NIDAP team's Trello board
Milestone
2024-11

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sync-by-unito bot commented Nov 12, 2024 •
edited by kelly-sovacool
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Tasks:

  1. Identify and mark Individual functions in Template - Nov 12
  1. Create Functions:
  • Function: Sample Validation
  • Function: Rename Samples
  • Function: Clean up Sample Name Colummns
  • Function: Read depth Plot
  • Function: Split Ensemble + Gene name
  • Function: Aggregate duplicate gene names
  1. Code Review
@sync-by-unito sync-by-unito bot added bug Something isn't working NIDAP sync with the NIDAP team's Trello board labels Nov 12, 2024
@kopardev kopardev added the MOSuite RepoName label Nov 12, 2024
@sync-by-unito sync-by-unito bot removed the bug Something isn't working label Nov 12, 2024
@sync-by-unito Sync by Unito
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sync-by-unito bot commented Nov 12, 2024

➤ philip.homan commented:

The Task "Identify and mark Individual functions in Template" has been completed

@sync-by-unito sync-by-unito bot changed the title Extract Template Code - Process Raw Data Extract Template Code - Clean Raw Counts Nov 19, 2024
@kelly-sovacool kelly-sovacool mentioned this issue Nov 19, 2024
Closed
@kelly-sovacool kelly-sovacool self-assigned this Nov 19, 2024
kelly-sovacool pushed a commit that referenced this issue Nov 19, 2024
@phoman14 @kelly-sovacool
feat: add clean raw counts code from NIDAP
e0c07d6 
https://nidap.nih.gov/workspace/vector/view/ri.vector.main.workbook.db4b90af-0c04-4759-84ce-7f76bafe6b27\?branch\=Phil_MOWorkflow

towards #73
kelly-sovacool pushed a commit that referenced this issue Nov 19, 2024
@phoman14 @kelly-sovacool
feat: add clean raw counts code from NIDAP
c422ec7 
https://nidap.nih.gov/workspace/vector/view/ri.vector.main.workbook.db4b90af-0c04-4759-84ce-7f76bafe6b27\?branch\=Phil_MOWorkflow

towards #73
kelly-sovacool pushed a commit that referenced this issue Nov 19, 2024
@phoman14 @kelly-sovacool
feat: add clean raw counts code from NIDAP
1708afd 
https://nidap.nih.gov/workspace/vector/view/ri.vector.main.workbook.db4b90af-0c04-4759-84ce-7f76bafe6b27\?branch\=Phil_MOWorkflow

towards #73
@kelly-sovacool kelly-sovacool added this to the 2024-11 milestone Nov 26, 2024
@kelly-sovacool kelly-sovacool mentioned this issue Dec 27, 2024
Merged
kelly-sovacool pushed a commit that referenced this issue Dec 28, 2024
@phoman14 @kelly-sovacool
feat: add clean raw counts code from NIDAP
193cbe7 
https://nidap.nih.gov/workspace/vector/view/ri.vector.main.workbook.db4b90af-0c04-4759-84ce-7f76bafe6b27\?branch\=Phil_MOWorkflow

towards #73
@kelly-sovacool kelly-sovacool mentioned this issue Dec 28, 2024
Merged
5 tasks
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Labels
MOSuite RepoName NIDAP sync with the NIDAP team's Trello board
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Milestone
2024-11
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Add template: clean raw counts CCBR/MOSuite
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@kopardev @kelly-sovacool