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Update documentation for developing R script in docker container
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xies4 committed May 1, 2024
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To develop R scripts for single cell sequencing data, docker container can be used. In the docker container, development can be finished using jupyter-lab.
When developing R scripts for single-cell sequencing data analysis, utilizing Docker containers offers a streamlined and reproducible environment. This documentation outlines the process of developing R scripts within a Docker container, leveraging JupyterLab for efficient coding and visualization.

If the goal is to develop an R script named `sc_singleR.prod.R`, we create two files:
```
sc_seurat_opt.R
sc_singleR.ipynb
sc_seurat_opt.R # https://github.com/CCRSF-IFX/SF_sc-smk-wl/blob/main/scripts/rna/sc_singleR_opt.R
sc_singleR.ipynb # https://github.com/CCRSF-IFX/SF_sc-smk-wl/blob/main/scripts/rna/sc_singleR.ipynb
```

1. Record the script path:
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